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Job DescriptionP00490
Confidence100.00%DateThu Jan 5 10:56:40 GMT 2012
Rank4Aligned Residues776
% Identity44%Templated2gj4a1
SCOP infoUDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Oligosaccharide phosphorylase
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50....... ..60.........70.........80..
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Query Sequence  NDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVA. . . . NQRHVNYISMEFLIGRLTGNNLLNL
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Template Sequence  NVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNL
Template Known Secondary structure  TT


TTT





S


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   23......30.........40.........50.........60.........70.........80.........90.........100..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDW
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Template Sequence  ALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDW
Template Known Secondary structure  T
TT

TTS



STT



SB
S
TT


T
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   163......170.........180.........190 .........200.........210.........220.........230.........
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Query Sequence  HRSNYPWFRHNEALDVQVGIGGKVTKDG. . . RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDF
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Template Sequence  LRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP. . . . . . . . . . NGY
Template Known Secondary structure  TTT

TT

GGG
S

SSSS

SSSS


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   183......190.........200.........210.........220.........230.........240......... 250..
 
   240.........250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  LRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELL
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Template Sequence  IQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKS. . . NFDAFPDKVAIQLNDTHPSLAIPELM
Template Known Secondary structure  TGGGSB



SS





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GGGSSTTTT
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   263......270.........280.........290.........300.........310... ......320.........330.........
 
   320.........330.........340.........350.........360.........370.........380.........390.........
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Query Sequence  RVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAV
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Template Sequence  RVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSL
Template Known Secondary structure  TS







GGGS

STT

S
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   351........360.........370.........380.........390.........400.........410.........420.........430
 
   400.... .....410.........420.........430.........440.........450.........460.........470......
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Query Sequence  VHDKQ. . . VHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKE
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Template Sequence  VEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEE
Template Known Secondary structure 
SSS
T
S
SSTTT
GGG



B
T





T

SG
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   431........440.........450.........460.........470.........480.........490.........500.........510
 
   477..480.........490.........500.........510.........520.........530.........540.........550......
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Query Sequence  WANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEI
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Template Sequence  YISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRI
Template Known Secondary structure  GGG
GGGGGGGGGGTT





TTSS


GGGT
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   511........520.........530.........540.........550.........560.........570.........580.........590
 
   557..560.........570.........580.........590.........600.........610.........620.........630......
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Query Sequence  RENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAG
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Template Sequence  KKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAG
Template Known Secondary structure 
TTS







TT
TT
TTTGGGTT

GGG
S


TT
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   591........600.........610.........620.........630.........640.........650.........660.........670
 
   637..640.........650.........660.........670.........680.........690.........700.........710......
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Query Sequence  KEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKY
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Template Sequence  TEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFF
Template Known Secondary structure  S
S

STT

S
TT
GGGS
S





TTT
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   671........680.........690.........700.........710.........720.........730.........740.........750
 
   717..720.........730.........740.........750.........760.........770.........780.........790......
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Query Sequence  SDGDKHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAK
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Template Sequence  SPKQPDLFKDIVNMLM. . HHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVE
Template Known Secondary structure 
TTSTTTT..

TT
TGGGT
TT
GGGBTT


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   751........760...... ...770.........780.........790.........800.........810.........820........
 
   797
Predicted Secondary structure 
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Query Sequence  R
Query Conservation   
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Template Conservation 
Template Sequence  P
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   829
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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