Return to main results Retrieve Phyre Job Id

Job DescriptionP00490
Confidence100.00%DateThu Jan 5 10:56:40 GMT 2012
Rank3Aligned Residues777
% Identity44%Templated2atia1
SCOP infoUDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Oligosaccharide phosphorylase
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50....... ..60.........70.........80..
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Query Sequence  NDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVA. . . . NQRHVNYISMEFLIGRLTGNNLLNL
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Template Sequence  NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINL
Template Known Secondary structure 
TT


TTT





S


T
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   23......30.........40.........50.........60.........70.........80.........90.........100..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDW
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Template Sequence  GLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDW
Template Known Secondary structure  T
TT

TTS



STT



SB
S
TT


T
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   163......170.........180.........190 .........200.........210.........220.........230.........
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Query Sequence  HRSNYPWFRHNEALDVQVGIGGKVTKDG. . . RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDF
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Template Sequence  LRYGNPWEKSRPEFMLPVHFYGKVEHTNTGTKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPD. . . . . . . . . . . Y
Template Known Secondary structure  TTT

TT

GGG
S
TTS

TTSS



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   183......190.........200.........210.........220.........230.........240.........250 .
 
   240.........250.........260.........270.........280......... 290.........300.........310........
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Query Sequence  LRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHH. LAGRKLHELADYEVIQLNDTHPTIAIPEL
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Template Sequence  IQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFTVFDAFPDQVAIQLNDTHPALAIPEL
Template Known Secondary structure  TTGGGTB



SS




S




TTGGGTSSTTTT
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   263......270.........280.........290.........300.........310.........320.........330.........340..
 
   319320.........330.........340.........350.........360.........370.........380.........390........
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Query Sequence  LRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLA
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Template Sequence  MRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRLRRMS
Template Known Secondary structure  TS






SGGGS


TT

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   350.........360.........370.........380.........390.........400.........410.........420.........
 
   399400... ......410.........420.........430.........440.........450.........460.........470.....
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Query Sequence  VVHDK. . . QVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQK
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Template Sequence  LIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELIAEKIGE
Template Known Secondary structure  S
SSS
T
SSSTTTTT
TTT



B
T





T

S
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   430.........440.........450.........460.........470.........480.........490.........500.........
 
   476...480.........490.........500.........510.........520.........530.........540.........550.....
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Query Sequence  EWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKE
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Template Sequence  DYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSMFDVQVKRIHEYKRQLLNCLHVITMYNR
Template Known Secondary structure  GGGT
GGGGGGGGGGTT
SS



TTSS


TTTT
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   510.........520.........530.........540.........550.........560.........570.........580.........
 
   556...560.........570.........580.........590.........600.........610.........620.........630.....
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Query Sequence  IRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTA
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Template Sequence  IKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTA
Template Known Secondary structure 
TTS







TT
T
TTTGGG
S

GGG
S


T
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   590.........600.........610.........620.........630.........640.........650.........660.........
 
   636...640.........650.........660.........670.........680.........690.........700.........710.....
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Query Sequence  GKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGK
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Template Sequence  GTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELKLVIDQIDNGF
Template Known Secondary structure  TT
S

STT

S
TT
GGGS
S





TS
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   670.........680.........690.........700.........710.........720.........730.........740.........
 
   716...720.........730.........740.........750.........760.........770.........780.........790.....
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Query Sequence  YSDGDKHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQA
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Template Sequence  FSPKQPDLFKDIINMLF. . YHDRFKVFADYEAYVKCQDKVSQLYMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNV
Template Known Secondary structure  S
SS
TTTT..S
TT
T
T
GGGBTT

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   750.........760...... ...770.........780.........790.........800.........810.........820.......
 
   796
Predicted Secondary structure 
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Query Sequence  K
Query Conservation   
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Template Conservation   
Template Sequence  E
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   828
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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