Job Description P00490 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 6 Aligned Residues 790 % Identity 43% Template d1ygpa_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Oligosaccharide phosphorylase Resolution 2.80

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure												.																																																.	.	.	.
Query SS confidence												.																																																.	.	.	.
Query Sequence		M	S	Q	P	I	F	N	D	K	Q	.	F	Q	E	A	L	S	R	Q	W	Q	R	Y	G	L	N	S	A	A	E	M	T	P	R	Q	W	W	L	A	V	S	E	A	L	A	E	M	L	R	A	Q	P	F	A	K	P	V	A	.	.	.	.	N	Q	R	H	V	N	Y	I	S	M	E	F	L	I	G	R	L	T
Query Conservation												.																																																.	.	.	.
Alig confidence												.																																																.	.	.	.
Template Conservation
Template Sequence		H	Q	V	K	K	F	N	K	A	E	D	F	Q	D	R	F	I	D	H	V	E	T	T	L	A	R	S	L	Y	N	C	D	D	M	V	A	Y	E	A	A	S	M	S	I	R	D	N	L	V	I	D	W	N	K	T	Q	Q	K	F	T	T	R	D	P	K	R	V	Y	Y	L	S	L	E	F	L	M	G	R	A	L
Template Known Secondary structure		T							S														T	T	S				G	G	G																																										S					B
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	N	N	L	L	N	L	G	W	Y	Q	D	.	V	Q	D	S	L	K	A	Y	D	I	N	L	T	D	L	L	E	E	E	I	D	P	A	L	G	N	G	G	L	G	R	L	A	A	C	F	L	D	S	M	A	T	V	G	Q	S	A	T	G	Y	G	L	N	Y	Q	Y	G	L	F	R	Q	S	F	V	D	G	K
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		D	N	A	L	I	N	M	K	I	P	R	E	M	I	K	G	A	L	D	E	L	G	F	K	L	E	D	V	L	D	Q	E	P	D	A	G	L	G	N	G	G	L	G	R	L	A	A	C	F	V	D	S	M	A	T	E	G	I	P	A	W	G	Y	G	L	R	Y	E	Y	G	I	F	A	Q	K	I	I	D	G	Y
Template Known Secondary structure							S																T								T	T				B		S			S																T	T											S	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		Q	V	E	A	P	D	D	W	H	R	S	N	Y	P	W	F	R	H	N	E	A	L	D	V	Q	V	G	I	G	G	K	V	T	K	D	G	.	.	.	.	.	R	W	E	P	E	F	T	I	T	G	Q	A	W	D	L	P	V	V	G	Y	R	N	G	V	A	Q	P	L	R	L	W	Q	A	T	H	A	H	P	F
Query Conservation																																						.	.	.	.	.
Alig confidence																																						.	.	.	.	.
Template Conservation
Template Sequence		Q	V	E	T	P	D	Y	W	L	N	S	G	N	P	W	E	I	E	R	N	E	V	Q	I	P	V	T	F	Y	G	Y	V	D	R	P	T	T	L	S	A	S	Q	W	I	G	G	E	R	V	L	A	V	A	Y	D	F	P	V	P	G	F	K	T	S	N	V	N	N	L	R	L	W	Q	A	R	P	T	T	E	F
Template Known Secondary structure									T	T	T	T			T	T														S								T	T	S							S															S	S															S		S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	K	F	N	D	G	D	F	L	R	A	E	Q	Q	G	I	N	A	E	K	L	T	K	V	L	Y	P	N	D	N	H	T	A	G	K	K	L	R	L	M	Q	Q	Y	F	Q	C	A	C	S	V	A	D	I	L	R	R	H	H	L	A	G	R	K	L	H	E	L	A	D	Y	E	V	I	Q	L	N	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	N	K	F	N	N	G	D	Y	K	N	S	V	A	Q	Q	Q	R	A	E	S	I	T	A	V	L	Y	P	N	D	N	F	A	Q	G	K	E	L	R	L	K	Q	Q	Y	F	W	C	A	A	S	L	H	D	I	L	R	R	F	K	K	S	K	R	P	W	T	E	F	P	D	Q	V	A	I	Q	L	N	D	T
Template Known Secondary structure								T	T						T												S	S	S				S	S																														T			G	G	G											S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	T	I	A	I	P	E	L	L	R	V	L	I	D	E	H	Q	M	S	W	D	D	A	W	A	I	T	S	K	T	F	A	Y	T	N	H	T	L	M	P	E	A	L	E	R	W	D	V	K	L	V	K	G	L	L	P	R	H	M	Q	I	I	N	E	I	N	T	R	F	K	T	L	V	E	K	T	W	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	P	T	L	A	I	V	E	L	Q	R	V	L	V	D	L	E	K	L	D	W	H	E	A	W	D	I	V	T	K	T	F	A	Y	T	N	H	T	V	M	Q	E	A	L	E	K	W	P	R	R	L	F	G	H	L	L	P	R	H	L	E	I	I	Y	D	I	N	W	F	F	L	E	D	V	A	K	K	F	P	K
Template Known Secondary structure		T	T	T													T	T																							S	G	G	G	S																																		S	T	T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		390	.	.	.	.	.	.	.	.	.	400	.	.	.					.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																.	.	.	.																																							.
Query SS confidence																.	.	.	.																																							.
Query Sequence		D	E	K	V	W	A	K	L	A	V	V	H	D	K	.	.	.	.	Q	V	H	M	A	N	L	C	V	V	G	G	F	A	V	N	G	V	A	A	L	H	S	D	L	V	V	K	D	L	F	P	E	Y	H	Q	L	W	.	P	N	K	F	H	N	V	T	N	G	I	T	P	R	R	W	I	K	Q	C	N	P	A
Query Conservation																.	.	.	.																																							.
Alig confidence																.	.	.	.																																							.
Template Conservation
Template Sequence		D	V	D	L	L	S	R	I	S	I	I	E	E	N	S	P	E	R	Q	I	R	M	A	F	L	A	I	V	G	S	H	K	V	N	G	V	V	E	L	H	S	E	L	I	K	T	T	I	F	K	D	F	I	K	F	Y	G	P	S	K	F	V	N	V	T	N	G	I	T	P	R	R	W	L	K	Q	A	N	P	S
Template Known Secondary structure			T								S					S	S	S																			S	S										T	T	T									G	G	G								B						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		465	.	.	.	.	470	.	.	.	.				.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.							520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure												.	.	.																																														.	.	.	.	.	.
Query SS confidence												.	.	.																																														.	.	.	.	.	.
Query Sequence		L	A	A	L	L	D	K	S	L	Q	.	.	.	K	E	W	A	N	D	L	D	Q	L	I	N	L	E	K	F	A	D	D	A	K	F	R	Q	Q	Y	R	E	I	K	Q	A	N	K	V	R	L	A	E	F	V	K	V	R	T	.	.	.	.	.	.	G	I	E	I	N	P	Q	A	I	F	D	I	Q	I	K	R
Query Conservation												.	.	.																																														.	.	.	.	.	.
Alig confidence												.	.	.																																														.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	K	L	I	S	E	T	L	N	D	P	T	E	E	Y	L	L	D	M	A	K	L	T	Q	L	E	K	Y	V	E	D	K	E	F	L	K	K	W	N	Q	V	K	L	N	N	K	I	R	L	V	D	L	I	K	K	E	N	D	G	V	D	I	I	N	R	E	Y	L	D	D	T	L	F	D	M	Q	V	K	R
Template Known Secondary structure										T	T		T	T		G	G	G	T		G	G	G	G	G	G	G	G	G	G	G	G		T																								T	T	T	T				S		S	T	T	G	G	G								S
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.										.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		L	H	E	Y	K	R	Q	H	L	N	L	L	H	I	L	A	L	Y	K	E	I	R	.	.	.	.	.	.	.	.	.	E	N	P	Q	A	D	R	V	P	R	V	F	L	F	G	A	K	A	A	P	G	Y	Y	L	A	K	N	I	I	F	A	I	N	K	V	A	D	V	I	N	N	D	P	L	V	G	D	K	L
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	E	Y	K	R	Q	Q	L	N	V	F	G	I	I	Y	R	Y	L	A	M	K	N	M	L	K	N	G	A	S	I	E	E	V	A	R	K	Y	P	R	K	V	S	I	F	G	G	K	S	A	P	G	Y	Y	M	A	K	L	I	I	K	L	I	N	C	V	A	D	I	V	N	N	D	E	S	I	E	H	L	L
Template Known Secondary structure				G	G	G	T																					T	T										S													T	T																			T	T		G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	V	F	L	P	D	Y	C	V	S	A	A	E	K	L	I	P	A	A	D	I	S	E	Q	I	S	T	A	G	K	E	A	S	G	T	G	N	M	K	L	A	L	N	G	A	L	T	V	G	T	L	D	G	A	N	V	E	I	A	E	K	V	G	E	E	N	I	F	I	F	G	H	T	V	E	Q	V	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	V	F	V	A	D	Y	N	V	S	K	A	E	I	I	I	P	A	S	D	L	S	E	H	I	S	T	A	G	T	E	A	S	G	T	S	N	M	K	F	V	M	N	G	G	L	I	I	G	T	V	D	G	A	N	V	E	I	T	R	E	I	G	E	D	N	V	F	L	F	G	N	L	S	E	N	V	E	E
Template Known Secondary structure							T	T										G	G	G		S								T	T			S										T	T	T							S		T											G	G	G	S				S
Template Predicted Secondary structure
Template SS confidence
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
		687	.	.	690		.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.		.	.	.
Predicted Secondary structure						.																																																																								.
Query SS confidence						.																																																																								.
Query Sequence		I	L	A	K	.	G	Y	D	P	V	K	W	R	K	K	D	K	V	L	D	A	V	L	K	E	L	E	S	G	K	Y	S	D	G	D	K	H	A	F	D	Q	M	L	H	S	I	G	K	Q	G	G	D	P	Y	L	V	M	A	D	F	A	A	Y	V	E	A	Q	K	Q	V	D	V	L	Y	R	D	.	Q	E	A
Query Conservation						.																																																																								.
Alig confidence						.																					.	.	.	.	.																		.																													.
Template Conservation																											.	.	.	.	.																		.
Template Sequence		L	R	Y	N	H	Q	Y	H	P	Q	D	L	P	S	S	L	D	S	V	L	S	Y	I	E	Q	.	.	.	.	.	F	S	P	E	N	P	N	E	F	K	P	L	V	D	S	I	K	.	Y	H	G	D	Y	Y	L	V	S	D	D	F	E	S	Y	L	A	T	H	E	L	V	D	Q	E	F	H	N	Q	R	S	E
Template Known Secondary structure									S															T			.	.	.	.	.			T	T	S	T	T	T	T									.		S	T	T	T	T
Template Predicted Secondary structure																											.	.	.	.	.																		.
Template SS confidence
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.						.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.		.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.
		765	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	R	A	A	I	L	N	T	A	R	C	G	M	F	S	S	D	R	S	I	R	D	Y	Q	A	R	I	W	Q	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	K	K	S	V	L	S	L	A	N	V	G	F	F	S	S	D	R	C	I	E	E	Y	S	D	T	I	W	N	V	E
Template Known Secondary structure														G	G	G	B												T	T
Template Predicted Secondary structure
Template SS confidence
		797	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.