Job Description P00490 Confidence 97.91% Date Thu Jan 5 10:56:40 GMT 2012 Rank 17 Aligned Residues 196 % Identity 14% Template c3s29C_ PDB info PDB header:transferase Chain: C: PDB Molecule:sucrose synthase 1; PDBTitle: the crystal structure of sucrose synthase-1 from arabidopsis thaliana2 and its functional implications. Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.			.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		G	I	E	I	N	P	Q	A	I	F	D	I	Q	I	K	R	L	H	E	Y	K	R	Q	H	L	N	L	L	H	I	L	A	L	Y	K	E	I	R	E	N	P	Q	A	D	R	V	P	R	V	F	L	F	G	A	.	.	K	A	A	P	G	Y	Y	L	A	K	N	I	I	F	A	I	N	K	V	A	D	V	I	N
Query Conservation																																																								.	.
Alig confidence																											.																		.	.	.	.	.	.						.	.																						.	.	.
Template Conservation																											.																		.	.	.	.	.	.																													.	.	.
Template Sequence		C	V	L	K	D	K	K	K	P	I	L	F	T	M	A	R	L	D	R	V	K	N	L	S	G	.	L	V	E	W	Y	G	K	N	T	R	L	R	E	L	A	N	L	.	.	.	.	.	.	V	V	V	G	G	D	R	R	K	E	S	K	D	N	E	E	K	A	E	M	K	K	M	Y	D	L	I	E	.	.	.
Template Known Secondary structure		S		B	S		T	T	S										S	T	T	T	T				.																		.	.	.	.	.	.							T	T	S																				.	.	.
Template Predicted Secondary structure																											.																		.	.	.	.	.	.																													.	.	.
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.							.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.			.	.	.	.	620	.	.	.	.	.	.	.				.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure																				.	.													.	.	.
Query SS confidence																				.	.													.	.	.
Query Sequence		N	D	P	L	V	G	D	K	L	K	V	V	F	L	P	D	Y	C	.	.	V	S	A	A	E	K	L	I	P	A	A	D	.	.	.	I	S	E	Q	I	S	T	A	G	K	E	A	S	G	T	G	N	M	K	L	A	L	N	G	A	L	T	V	G	T	L	D	G	A	N	V	E	I	A	E	K	V	G	E	E
Query Conservation																				.	.													.	.	.
Alig confidence		.	.	.																.	.													.	.	.									.	.																																.	.
Template Conservation		.	.	.																																									.	.																																.	.
Template Sequence		.	.	.	E	Y	K	L	N	G	Q	F	R	W	I	S	S	Q	M	D	R	V	R	N	G	E	L	Y	R	Y	I	C	D	T	K	G	A	F	V	Q	P	A	L	Y	.	.	E	A	F	G	L	T	V	V	E	A	M	T	C	G	L	P	T	F	A	T	C	K	G	G	P	A	E	I	I	V	H	.	.	G	K
Template Known Secondary structure		.	.	.		T	T		T	B	T																							T	T								S		.	.	B	S	S											T							S	S	B	T							B	.	.	T	T
Template Predicted Secondary structure		.	.	.																																									.	.																																.	.
Template SS confidence
					635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.			.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.			.	.
		673	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	F	I	F	G	H	T	V	E	Q	V	K	A	I	L	A	K	G	Y	D	P	V	K	W	R	K	K	D	K	V	L	D	A	V	L	K	E	L	E	S	G	K	Y	S	D	G	D	K	H	A	F	D	Q	M	L	H	S	I	G	K	Q	G	G	D	P	Y	L	V	M	A	D	F	A	A	Y	V	E	A	Q
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	F	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	Y	H	G	D	Q	A	A	D	T	L	A	D	F	F	T	K	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		708	.	710	.	.																																								.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.		.	.	780	.	.	.	.	.	.	.	.	.	790						.	.	.	.
Predicted Secondary structure																											.														.	.	.	.	.
Query SS confidence																											.														.	.	.	.	.
Query Sequence		K	Q	V	D	V	L	Y	R	D	Q	E	A	W	T	R	A	A	I	L	N	T	A	R	C	G	.	M	F	S	S	D	R	S	I	R	D	Y	Q	A	.	.	.	.	.	R	I	W	Q
Query Conservation																											.														.	.	.	.	.
Alig confidence		.	.	.	.	.	.																				.														.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	K	E	D	P	S	H	W	D	E	I	S	K	G	G	L	Q	R	I	E	E	K	Y	T	W	Q	I	Y	S	Q	R	L	L	T	L	T	G	V	Y	G	F	W	K
Template Known Secondary structure		.	.	.	.	.	.				T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								732	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions