Job Description P00490 Confidence 78.68% Date Thu Jan 5 10:56:40 GMT 2012 Rank 31 Aligned Residues 187 % Identity 13% Template c3pe3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n- PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate Resolution 2.78 Å

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		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	G	I	E	I	N	P	Q	A	I	F	D	I	Q	I	K	R	L	H	E	Y	K	R	Q	H	L	N	L	L	H	I	L	A	L	Y	K	E	I	R	E	N	P	Q	A	D	R	V	P	R	V	F	L	F	G	A	K	A	A	P	G	Y	Y	L	A	K	N	I	I	F	A	I	N	K	V	A	D	V	I	N
Query Conservation
Alig confidence																																.	.	.	.	.	.									.	.	.	.										.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.									.	.	.	.										.	.	.	.	.	.	.
Template Sequence		R	S	Q	Y	G	L	P	E	D	A	I	V	Y	C	N	F	N	Q	L	Y	K	I	D	P	S	T	L	Q	M	W	.	.	.	.	.	.	A	N	I	L	K	R	V	P	.	.	.	.	N	S	V	L	W	L	L	R	F	.	.	.	.	.	.	.	P	A	V	G	E	P	N	I	Q	Q	Y	A	Q	N	M	G
Template Known Secondary structure		S	T	T	T	T			T	T	S							S		G	G	G										.	.	.	.	.	.							S	S	.	.	.	.	S								T	.	.	.	.	.	.	.	T	T	T												T	T
Template Predicted Secondary structure																																.	.	.	.	.	.									.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		822	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.							.	.	.	.	.	.	.	.					860	.	.	.	.	.	.	.	.								.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	P	L	V	G	D	K	L	K	V	V	F	L	P	D	Y	C	V	S	A	A	E	K	L	I	P	A	A	D	I	S	E	Q	I	S	T	A	G	K	E	A	S	G	T	G	N	M	K	L	A	L	N	G	A	L	T	V	G	T	L	D	G	A	N	V	E	I	A	E	K	V	G	E	E	N	I	F	I	F
Query Conservation
Alig confidence						.	.	.	.	.																													.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.																													.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	Q	N	.	.	.	.	.	R	I	I	F	S	P	V	A	P	K	E	E	H	V	R	R	G	Q	L	A	D	V	C	L	D	T	P	L	.	.	.	C	N	G	H	T	T	G	M	D	V	L	W	A	G	T	P	M	V	T	M	P	G	E	T	L	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				G	G	.	.	.	.	.	G															G	G	G	G		S						S	S	.	.	.	S			S									T	T					B				S	S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.																													.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		885	.	.	.						.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.				.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	T	V	E	Q	V	K	A	I	L	A	K	G	Y	D	P	V	K	W	R	K	K	D	K	V	L	D	A	V	L	K	E	L	E	S	G	K	Y	S	D	G	D	K	H	A	F	D	Q	M	L	H	S	I	G	K	Q	G	G	D	P	Y	L	V	M	A	D	F	A	A	Y	V	E	A	Q	K	Q	V	D	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	A	A	S	Q	L	T	C	L	G	C	L	E	L	I	A	K	N	R	Q	E	Y	E	D	I	A	V	K	L	G	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										T		G	G	G	B		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																		944	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	R	D	Q	E	A	W	T	R	A	A	I	L	N	T	A	R	C	G	M	F	S	S	D	R	S	I	R	D	Y	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	E	Y	L	K	K	V	R	G	K	V	W	K	Q	R	I	S	S	P	L	F	N	T	K	Q	Y	T	M	E	L	E	R
Template Known Secondary structure																				S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		976	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions