Job Description P00490 Confidence 100.00% Date Thu Jan 5 10:56:40 GMT 2012 Rank 5 Aligned Residues 772 % Identity 45% Template c2c4mA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycogen phosphorylase; PDBTitle: starch phosphorylase: structural studies explain oxyanion-2 dependent kinetic stability and regulatory control. Resolution 1.9 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		Q	E	A	L	S	R	Q	W	Q	R	Y	G	L	N	S	A	A	E	M	T	P	R	Q	W	W	L	A	V	S	E	A	L	A	E	M	L	R	A	Q	P	F	A	K	P	V	A	.	.	N	Q	R	H	V	N	Y	I	S	M	E	F	L	I	G	R	L	T	G	N	N	L	L	N	L	G	W	Y	Q	D	V	Q
Query Conservation																																																.	.
Alig confidence																																																.	.
Template Conservation
Template Sequence		A	A	L	V	G	S	H	V	R	A	A	A	G	T	P	A	D	L	A	T	D	R	K	F	W	T	G	L	S	R	A	V	Q	E	R	I	A	D	D	W	E	R	T	R	E	A	Y	G	A	A	R	Q	Q	H	Y	F	S	A	E	F	L	M	G	R	A	L	L	N	N	L	T	N	L	G	L	V	D	E	A	A
Template Known Secondary structure														S	S		T	T	T	S																														T	S								S					B		S								T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	L	K	A	Y	D	I	N	L	T	D	L	L	E	E	E	I	D	P	A	L	G	N	G	G	L	G	R	L	A	A	C	F	L	D	S	M	A	T	V	G	Q	S	A	T	G	Y	G	L	N	Y	Q	Y	G	L	F	R	Q	S	F	V	D	G	K	Q	V	E	A	P	D	D	W	H	R	S	N	Y	P	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	T	R	E	L	G	H	E	L	T	D	I	L	E	I	E	N	D	A	A	L	G	N	G	G	L	G	R	L	A	A	C	F	L	D	S	A	V	T	Q	D	Y	P	V	T	G	Y	G	L	L	Y	R	F	G	L	F	R	Q	S	F	N	E	G	F	Q	V	E	K	P	D	P	W	R	E	E	E	Y	P	F
Template Known Secondary structure							T	T								T	T				B					S																T	T											S	S		S							T	T									S	S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	H	N	E	A	L	D	V	Q	V	G	I	G	G	K	V	T	K	D	G	R	W	E	P	E	F	T	I	T	G	Q	A	W	D	L	P	V	V	G	Y	R	N	G	V	A	Q	P	L	R	L	W	Q	A	T	H	A	H	P	F	D	L	T	K	F	N	D	G	D	F	L	R	A	E	Q	Q	G	I	N	A
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	R	R	A	S	D	Q	L	V	V	C	F	D	D	M	.	.	.	.	.	.	.	.	.	.	.	K	T	R	A	I	P	Y	D	M	P	I	T	G	Y	G	T	H	N	V	G	T	L	R	L	W	K	A	E	P	W	E	E	F	D	Y	D	A	F	N	A	Q	R	F	T	D	A	I	I	E	R	E	R	V
Template Known Secondary structure		S				G	G	G							T	T		.	.	.	.	.	.	.	.	.	.	.														T	T															S	S	S	S							T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.												.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	T	K	V	L	Y	P	N	D	N	H	T	A	G	K	K	L	R	L	M	Q	Q	Y	F	Q	C	A	C	S	V	A	D	I	L	R	R	H	H	L	A	G	R	K	L	H	E	L	A	D	Y	E	V	I	Q	L	N	D	T	H	P	T	I	A	I	P	E	L	L	R	V	L	I	D	E	H	Q	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	I	C	R	V	L	Y	P	N	D	T	T	Y	E	G	K	K	L	R	V	R	Q	Q	Y	F	F	T	S	A	S	L	Q	A	M	I	Q	D	H	L	A	H	H	K	D	L	S	N	F	A	E	F	H	S	V	Q	L	N	D	T	H	P	V	L	A	I	P	E	L	M	R	L	L	M	D	E	H	D	M	G
Template Known Secondary structure							S	S	S				S	S																														S	S		S	T	T											S	S	T	T	T	T													S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	D	A	W	A	I	T	S	K	T	F	A	Y	T	N	H	T	L	M	P	E	A	L	E	R	W	D	V	K	L	V	K	G	L	L	P	R	H	M	Q	I	I	N	E	I	N	T	R	F	K	T	L	V	E	K	T	W	P	G	D	E	K	V	W	A	K	L	A	V	V	H	D	K	Q	V	H	M	A	N
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		W	E	E	S	W	A	I	V	S	K	T	F	A	Y	T	N	H	T	V	L	T	E	A	L	E	Q	W	D	E	Q	I	F	Q	Q	L	F	W	R	V	W	E	I	I	A	E	I	D	R	R	F	R	.	L	E	R	A	A	D	G	L	D	E	E	T	I	N	R	M	A	P	I	Q	H	G	T	V	H	M	A	W
Template Known Secondary structure																				S	S	S	T	T	S																												.						T	T											S			T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.		.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	C	V	V	G	G	F	A	V	N	G	V	A	A	L	H	S	D	L	V	V	K	D	L	F	P	E	Y	H	Q	L	W	P	N	K	F	H	N	V	T	N	G	I	T	P	R	R	W	I	K	Q	C	N	P	A	L	A	A	L	L	D	K	S	L	Q	.	K	E	W	A	N	D	L	D	Q	L	I	N	L	E
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		I	A	C	Y	A	A	Y	S	I	N	G	V	A	A	L	H	T	E	I	I	K	A	E	T	L	A	D	W	Y	A	L	W	P	E	K	F	N	N	K	T	N	G	V	T	P	R	R	W	L	R	M	I	N	P	G	L	S	D	L	L	T	R	L	S	G	S	D	D	W	V	T	D	L	D	E	L	K	K	L	R
Template Known Secondary structure								S					S	S										T	T	T								G	G	G								B		T						T	T													S	S	S	G	G	G	G		G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	A	D	D	A	K	F	R	Q	Q	Y	R	E	I	K	Q	A	N	K	V	R	L	A	E	F	V	K	V	R	T	G	I	E	I	N	P	Q	A	I	F	D	I	Q	I	K	R	L	H	E	Y	K	R	Q	H	L	N	L	L	H	I	L	A	L	Y	K	E	I	R	E	N	P	Q	A	D	R	V	P	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	A	D	D	K	S	V	L	E	E	L	R	A	I	K	A	A	N	K	Q	D	F	A	E	W	I	L	E	R	Q	G	I	E	I	D	P	E	S	I	F	D	V	Q	I	K	R	L	H	E	Y	K	R	Q	L	M	N	A	L	Y	V	L	D	L	Y	F	R	I	K	E	D	G	L	T	D	I	P	A	R	T
Template Known Secondary structure		G	G	G	G																																	T	T	S											G	G	G	T																	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	F	G	A	K	A	A	P	G	Y	Y	L	A	K	N	I	I	F	A	I	N	K	V	A	D	V	I	N	N	D	P	L	V	G	D	K	L	K	V	V	F	L	P	D	Y	C	V	S	A	A	E	K	L	I	P	A	A	D	I	S	E	Q	I	S	T	A	G	K	E	A	S	G	T	G	N	M	K	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	F	G	A	K	A	A	P	G	Y	V	R	A	K	A	I	I	K	L	I	N	S	I	A	D	L	V	N	N	D	P	E	V	S	P	L	L	K	V	V	F	V	E	N	Y	N	V	S	P	A	E	H	I	L	P	A	S	D	V	S	E	Q	I	S	T	A	G	K	E	A	S	G	T	S	N	M	K	F	M
Template Known Secondary structure										T	T																				T		T	T	T	T	T	T							T	T										G	G	G		S								T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	G	A	L	T	V	G	T	L	D	G	A	N	V	E	I	A	E	K	V	G	E	E	N	I	F	I	F	G	H	T	V	E	Q	V	K	A	I	L	A	K	G	Y	D	P	V	K	W	R	K	K	D	K	V	L	D	A	V	L	K	E	L	E	S	G	K	Y	S	D	G	D	K	H	A	F	D	Q	M	L
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		M	N	G	A	L	T	L	G	T	M	D	G	A	N	V	E	I	V	D	S	V	G	E	E	N	A	Y	I	F	G	A	R	V	E	E	L	P	A	L	R	E	.	S	Y	K	P	Y	E	L	Y	E	T	V	P	G	L	K	R	A	L	D	A	L	D	N	G	T	L	N	D	N	N	S	G	L	F	Y	D	L	K
Template Known Secondary structure			T	T							S	S	T											G	G	G	S				S			T	T	T							.	T										S	T	T							T	T	T	S	S	S	S			T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.		.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
		729	730	.	.					.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.		760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																												.
Query SS confidence						.	.	.	.																												.
Query Sequence		H	S	I	G	.	.	.	.	K	Q	G	G	D	P	Y	L	V	M	A	D	F	A	A	Y	V	E	A	Q	K	Q	V	D	V	L	Y	.	R	D	Q	E	A	W	T	R	A	A	I	L	N	T	A	R	C	G	M	F	S	S	D	R	S	I	R	D	Y	Q	A	R	I	W	Q	A	K
Query Conservation						.	.	.	.																												.
Alig confidence						.	.	.	.																												.
Template Conservation
Template Sequence		H	S	L	I	H	G	Y	G	K	D	A	S	D	T	Y	Y	V	L	G	D	F	A	D	Y	R	E	T	R	D	R	M	A	A	D	Y	A	S	D	P	L	G	W	A	R	M	A	W	I	N	I	C	E	S	G	R	F	S	S	D	R	T	I	R	D	Y	A	T	E	I	W	K	L	E
Template Known Secondary structure						S			G	G	G		S		T	T																																						G	G	G	G	B												T	T
Template Predicted Secondary structure
Template SS confidence
		716	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.