Job Description P00490 Confidence 13.29% Date Thu Jan 5 10:56:40 GMT 2012 Rank 69 Aligned Residues 95 % Identity 17% Template c1yhuA_ PDB info PDB header:oxygen storage/transport Chain: A: PDB Molecule:hemoglobin a1 chain; PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits. Resolution 3.15 Å

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		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470																					.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	L	H	S	D	L	V	V	K	D	L	F	P	E	Y	H	Q	L	W	P	N	K	F	H	N	V	T	N	G	I	T	P	R	R	W	I	K	Q	C	N	P	A	L	A	A	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	L	Q	K	E	W	A	N	D	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation													.	.	.	.																																																										.
Template Sequence		A	M	L	E	R	A	K	V	K	D	E	.	.	.	.	W	A	K	A	Y	G	I	G	A	A	R	S	K	F	G	D	A	L	W	R	N	V	F	N	Y	A	P	N	A	R	D	I	F	E	S	V	N	S	K	D	M	A	S	P	E	F	K	A	H	I	A	R	V	L	G	G	L	.	D	R	V	I	S	M	L
Template Known Secondary structure													.	.	.	.							S	S																			G	G	G	G	G	G	G	G	G	G	T	T	T	S	T	T	S															.					T	T	T
Template Predicted Secondary structure													.	.	.	.																																																										.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.											.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Q	L	I	N	L	E	K	F	A	D	D	A	K	F	R	Q	Q	Y	R	E	I	K	Q	A	.	.	.	.	.	.	.	.	.	.	N	K	V	R	L	A	E	F	V	K	V	R	T	G	I	E	I	N	P	Q	A
Query Conservation																											.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		D	N	Q	A	T	L	D	A	D	L	.	.	.	.	.	.	A	H	L	K	S	Q	H	D	P	R	T	I	D	P	V	N	F	V	V	F	R	K	A	L	I	A	T	V	A	G	T	F	G	V	C	F	D	V	P	A
Template Known Secondary structure		T										.	.	.	.	.	.								G	G	G				T																				T	T
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions