Return to main results Retrieve Phyre Job Id

Job DescriptionP37128
Confidence99.74%DateThu Jan 5 11:54:49 GMT 2012
Rank12Aligned Residues130
% Identity15%Templated1vk6a2
SCOP infoNudix Nudix NADH pyrophosphatase
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.. .......100.........110.........120..
Predicted Secondary structure 


























.




Query SS confidence 
















































.





























Query Sequence  RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDE. PEVCIRKEAIEETGYEVGEVRKLFELYMSP
Query Conservation      
 

        



 


  
           
 


 

 

.  


 


 



        
       
Alig confidence 










.














........













.





























Template Conservation       


 
 .    


        ........  
 



  
 


   

 


 




               
Template Sequence  QIAPCIIVAIR. RDDSILLAQHTRHRN. . . . . . . . GVHTVLAGFVEVGETLEQAVAREVXEESGIKVKNLRYVTSQPWPF
Template Known Secondary structure 

.TTTTT
S........S

B


TT



T
Template Predicted Secondary structure 



.






........

















Template SS confidence 















































































   126...130...... ...140.........150. ........160.........170.........180.........190......
 
   123......130.........140.........150.........160.........170.........180........
Predicted Secondary structure 


























Query SS confidence 

































































Query Sequence  GGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLLLNYLQTSH
Query Conservation 
   
      
              
 
 


      
    
  
 
 
  

 

  
    
Alig confidence 












......














































Template Conservation               ......         
     
    

  
     
   

   

  
   
Template Sequence  PQSLXTAFXAEYD. . . . . . SGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAXCRAEY
Template Known Secondary structure  T......





TTTTTS

S


TTS

Template Predicted Secondary structure 



......

















Template SS confidence 

































































   197..200......... 210.........220.........230.........240.........250......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions