|   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
G | A | T | I | L | L | Y | N | T | K | K | K | T | V | . |
. |
. |
. |
. |
. |
. |
. |
V | L | I | R | Q | F | R | V | A | T | W | V | N | G | N | E | S | G | Q | L | I | E | S | C | A | G | L | L | D | N | D | E | . |
. |
P | E | V | C | I | R | K | E | A | I | E | E | T | G | Y | E | V | G | E | V | R | K | L | . |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . |
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|
| . | . |   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |
| . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |
|
| . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
A | C | H | A | L | L | H | A | P | S | Q | A | K | L | F | D | R | V | P | I | R | R | V | L | L | M | M | M | R | F | D | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | L | G | F | P | G | G | F | V | D | T | R | D | I | S | L | E | E | G | L | K | R | E | L | E | E | E | L | G | P | A | L | A | T | V | E | V | T | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  | T | T | T |  |  |
|
|  |  |  |  |  |  |  |  | T | T | S | . | . | . | . | . | . | . | . | . |
|  |  |
| S |  |  |  |  |
| T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | G |
|
|
|
| G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
  |   |
|
|
|
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
F | E | L | Y | M | S | P | G | G | V | T | E | L | I | H | F | F | I | A | E | Y | S | . |
. |
. |
. |
. |
. |
D | N | Q | R | A | N | A | G | G | G | V | E | D | E | D | I | E | V | L | E | L | P | F | S | Q | A | L | E | . |
. |
. |
. |
. |
. |
. |
M | I | K | T | G | E | I | R | D | G | K | T | V | L |
Query Conservation |   |
. | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|   |   |   |
|
|
|
|
|
|   |   |   |
|
|
|   |
|   |   |
|
|
Template Sequence |   |
D | D | Y | R | S | S | Q | V | R | E | H | P | Q | K | C | V | T | H | F | Y | I | K | E | L | K | L | E | E | I | E | R | I | E | A | E | A | V | N | A | K | D | H | G | L | E | V | M | G | L | I | R | V | P | L | Y | T | L | R | D | R | V | G | G | L | P | A | F | L | C | N | N | F | I | G | N | S | K | S | Q | L |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T | B | T | T | T |  |  |  |  |  |  |
|
|
| S | B |
| T | T | S | S | T | B |  |  |  |  | T | T | S |
| B |
| T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | N | Y | L | Q | T | S | H | L | M |
Query Conservation |   |
|
|   |   |
|   |   |   |   |
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |
|
|   |   |   |   |   |
|
Template Sequence |   |
. |
L | Y | A | L | R | S | L | K | L | L |
Template Known Secondary structure |   |
. |  |  |  |  |  |  | T | T | S | S |
Template Predicted Secondary structure |   |
. |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
186 | . | . | . | 190 | . | . | . | . | . |
  |