Job Description P37128 Confidence 97.52% Date Thu Jan 5 11:54:49 GMT 2012 Rank 82 Aligned Residues 75 % Identity 19% Template c3kvhA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:protein syndesmos; PDBTitle: crystal structure of human protein syndesmos (nudt16-like protein) Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		N	G	A	T	I	L	L	Y	N	T	K	K	K	T	.	.	.	.	.	.	.	.	.	V	V	L	I	R	Q	F	R	V	A	T	W	V	N	G	N	E	S	G	Q	L	I	E	S	C	A	G	L	L	D	N	D	E	.	.	P	E	V	C	I	R	K	E	A	I	E	E	T	G	Y	E	V	G	E	V	R	K
Query Conservation																.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence																.	.	.	.	.	.	.	.	.					.							.	.	.	.	.	.	.	.	.														.	.																				.	.
Template Conservation																													.							.	.	.	.	.	.	.	.	.																																			.	.
Template Sequence		H	S	C	H	A	M	L	Y	A	A	N	P	G	Q	L	F	G	R	I	P	M	R	F	S	V	L	M	.	Q	M	R	F	D	G	.	.	.	.	.	.	.	.	.	L	L	G	F	P	G	G	F	V	D	R	R	F	W	S	L	E	D	G	L	N	R	V	L	G	L	G	L	R	L	T	E	A	D	.	.	Y
Template Known Secondary structure																	T	T	T										.				T	T	S	.	.	.	.	.	.	.	.	.					S						T	T	T										S			S						G	G	G	.	.
Template Predicted Secondary structure																													.							.	.	.	.	.	.	.	.	.																																			.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	E	L	Y	M	S	P	G	G	V	T	E	L	I	H	F	F	I	A	E	Y	S
Query Conservation
Alig confidence							.	.	.	.	.
Template Conservation							.	.	.	.	.
Template Sequence		L	S	S	H	L	.	.	.	.	.	T	R	V	V	A	H	L	Y	A	R	Q	L	T
Template Known Secondary structure							.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		97	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions