 |
Job Description | P37128 | Confidence | 99.64% | Date | Thu Jan 5 11:54:49 GMT 2012 |
Rank | 25 | Aligned Residues | 130 |
% Identity | 15% | Template | c3gg6A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:nucleoside diphosphate-linked moiety x motif 18; |
PDBTitle: crystal structure of the nudix domain of human nudt18
|
Resolution | 2.10 Å |
|
 |
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | I | L | L | Y | N | T | K | K | K | T | V | V | L | I | R | Q | F | R | V | A | T | W | V | N | G | N | E | S | G | Q | L | I | E | S | C | A | G | L | L | D | N | D | E | . |
P | E | V | C | I | R | K | E | A | I | E | E | T | G | Y | E | V | G | E | V | R | K | L | F | E | L | Y | M | S | P | G | G | V | T |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|
| . |   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
Template Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |
|   |
|   |
|
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |
Template Sequence |   |
V | V | L | A | V | F | L | S | E | Q | D | E | V | L | L | I | Q | E | A | K | R | E | . |
. |
. |
. |
. |
. |
. |
C | R | G | S | W | Y | L | P | A | G | R | M | E | P | G | E | T | I | V | E | A | L | Q | R | E | V | K | E | E | A | G | L | H | C | E | P | E | T | L | L | S | V | E | E | R | G | P | . |
. |
. |
S |
Template Known Secondary structure |   |
 |  |  |  |  |
| B |
| T | T | S |  |  |  |  |  |  |
|
|
| T | T | . | . | . | . | . | . | . | S | T | T |
|  |  |
| S |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | T | . | . | . | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
. |
  |
  |   |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | I | H | F | F | I | A | E | Y | S | D | N | Q | R | A | N | A | G | G | G | V | E | D | E | D | I | E | V | L | E | L | P | F | S | Q | A | L | E | M | I | K | T | G | E | I | R | D | G | K | T | V | L | L | L | N | Y | L | Q | T | S | H |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
W | V | R | F | V | F | L | A | R | P | T | G | G | I | L | K | T | S | K | E | A | D | . |
A | E | S | L | Q | A | A | W | Y | P | R | T | S | L | P | T | P | L | R | A | H | D | I | L | H | L | V | E | L | A | A | Q | Y | R | Q | Q | A | R | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| G | G | G |
| S | . | S | S |
| S |  |  |  |  |  |  | T | T | S |
|
| S | S | B | S |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|