 |
Job Description | P37128 | Confidence | 99.40% | Date | Thu Jan 5 11:54:49 GMT 2012 |
Rank | 63 | Aligned Residues | 105 |
% Identity | 20% | Template | c3f6aA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:hydrolase, nudix family; |
PDBTitle: crystal structure of a hydrolase, nudix family from2 clostridium perfringens
|
Resolution | 2.02 Å |
|
 |
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
R | G | N | G | A | T | I | L | L | Y | N | T | K | K | K | T | V | V | L | I | R | Q | F | R | V | A | T | W | V | N | G | N | E | S | G | Q | L | I | E | S | C | A | G | L | L | D | N | D | E | . |
P | E | V | C | I | R | K | E | A | I | E | E | T | G | Y | E | V | G | E | V | R | K | L | F | E | L | . |
. |
. |
. |
Query Conservation |   |
  |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|
| . |   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   | . | . |   |   |   |
|
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | H | F | T | V | S | V | F | I | V | C | . |
. |
K | D | K | V | L | L | H | L | H | K | K | A | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | X | L | P | L | G | G | H | I | E | V | N | E | L | P | E | E | A | C | I | R | E | A | K | E | E | A | G | L | N | V | T | L | Y | N | P | I | D | I | N | L | K | K | S |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  | . | . | T | T |  |  |  |  |  |  |
| S | S | S |
| . | . | . | . | . | . | . | . | . | . |
|  |  |
|  |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | M | S | P | G | G | V | T | E | L | I | H | F | F | I | A | E | Y | S | D | N | Q | R | A | N | A | G | G | G | V | E | D | E | D | I | E | V | L | E | L | P | F | S | Q | A |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|
|
Template Sequence |   |
C | D | L | S | G | E | K | L | L | I | N | P | I | H | T | I | L | G | D | V | S | P | N | H | S | H | I | D | F | V | Y | Y | A | . |
. |
. |
T | T | T | S | F | E | T | S | P | E | I | G | E | S | K | I | L | K | W | Y | S | K | E | D | L |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|
|
|
|
|
| S |  |  |  |  |  |
| S | S | S | S | S |
|  |  |  |  |  |  |  |  | . | . | . |  |
| S |
| S |
|
|
|
|
| T | T | S |
|
|
|  |  |  |  |
| S | S | S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|