Return to main results Retrieve Phyre Job Id

Job DescriptionP37128
Confidence99.55%DateThu Jan 5 11:54:49 GMT 2012
Rank44Aligned Residues133
% Identity14%Templatec2qkmF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:spac19a8.12 protein; PDBTitle: the crystal structure of fission yeast mrna decapping enzyme dcp1-dcp22 complex
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.. .......100.........110.........120....
Predicted Secondary structure 
























.






Query SS confidence 














































.































Query Sequence  NGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDE. PEVCIRKEAIEETGYEVGEVRKLFELYMSPGG
Query Conservation    
 

        



 


  
           
 


 

 

.  


 


 



        
       
 
Alig confidence 
























.........












.

























.




Template Conservation 

 



 
    





      ......... 
 






 


   

 


 






         .
    
Template Sequence  PVRGAIMLDMSMQQCVLVKGWKASS. . . . . . . . . GWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINPNEF. IDMTI
Template Known Secondary structure  B
TTS

SSTT
.........
BB
S

TT

S


TTT

TT
.
Template Predicted Secondary structure 










.........



















.

Template SS confidence 















































































   97..100.........110.........120. ........130.........140.........150.........160. .....
 
   125....130.........140.........150.........160.........170. ........180.........
Predicted Secondary structure 




















....




Query SS confidence 














































. . . .

















Query Sequence  VTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGE. . . . IRDGKTVLLLNYLQTSHL
Query Conservation    
      
              
 
 


      
    
  
 ....
 
  

 

  
    
Alig confidence 





















.























....

















Template Conservation        


   
 

    
 .   

  
 

 
 


         
  
 



 

 

     
Template Sequence  RGQNVRLYIIPGISLDTRFESR. TRKEISKIEWHNLMDLPTFKKNMKNKFYMVIPFLAPLKKWIKKRNI
Template Known Secondary structure  TT



TT




S.S
TT

GGGSTTSS





BSS
Template Predicted Secondary structure 













.











Template SS confidence 




































































   167..170.........180........ .190.........200.........210.........220.........230....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions