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Job DescriptionP02924
Confidence99.07%DateThu Jan 5 10:57:38 GMT 2012
Rank72Aligned Residues258
% Identity12%Templated2liva_
SCOP infoPeriplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30....... ..40.........50... ..... .60.........70.........80.........90.
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Query Sequence  ENLKLGFLVKQPEE. . PWFQTEWKFADKAGKD. . . . . . . LGFEV. . . IKIAVPDGEKTLNAIDSLAASGAKGFVICTPDP
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Template Sequence  EDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIAKYDDACDPKQAVAVANKVVNDGIKYVIG. HLCS
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SSSSSTTTBTTB

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   1........10.........20.........30.........40.........50.........60.........70..... ....
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  KLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTA
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Template Sequence  SSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQR. . . . . . . . IAIVHDKQQYG
Template Known Secondary structure  TT
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GGGSSS

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GGGTT

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   80.........90.........100.........110.........120.........130.........140 .........150.
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  RRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIG
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Template Sequence  EGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKK. . . . . . ENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGP
Template Known Secondary structure  TTT



TT



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   152.......160.........170.........180.........190. ........200.........210.........220.....
 
   252.......260.........270.........280. ........290......
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Query Sequence  IGINGVDAVSELSKAQATGFYGSLLPSPDV. . . . . . . . . . . . . . . . . . . . . . . HGYKSSEMLYNWVAK
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Template Sequence  EGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQ
Template Known Secondary structure  GGG

GGGGTT



GGGSGGGTTTT

TTSSTT
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   226...230.........240.........250.........260.........270.........280.........290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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