Job Description P02924 Confidence 100.00% Date Thu Jan 5 10:57:38 GMT 2012 Rank 42 Aligned Residues 269 % Identity 13% Template c3qk7C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcriptional regulator from yersinia2 pestis biovar microtus str. 91001 Resolution 2.70 Å

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		24	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		E	N	L	K	L	G	F	L	V	K	Q	P	.	.	.	.	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	L	G	F	E	V	I	K	I	A	V	P	D	G	E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	G	F	V	I	C	T	P	D	P	K	L	G	S	A	I	V	A
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																																																										.	.
Template Conservation																																																																											.	.
Template Sequence		R	T	D	A	I	A	L	A	Y	P	S	R	P	R	V	L	N	N	S	T	F	L	E	X	I	S	W	I	G	I	E	L	G	K	R	G	L	D	L	L	L	I	P	D	E	P	G	E	K	Y	Q	S	L	I	H	L	V	E	T	R	R	V	D	A	L	I	V	A	H	T	Q	P	E	.	.	D	F	R	L	Q
Template Known Secondary structure												S	S	S	G	G	G																		T	T	T										T	T												T	T			S						S			S	S	.	.
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	R	G	Y	D	M	K	V	I	A	V	D	D	Q	F	V	N	A	K	G	K	P	M	D	T	V	P	L	V	M	M	A	A	T	K	I	G	E	R	Q	G	Q	E	L	Y	K	E	M	Q	K	R	G	W	D	V	K	E	S	A	V	M	A	I	T	A	N	E	L	D	T	A	R	R	R	T	T	G	S	M
Query Conservation
Alig confidence																						.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Sequence		Y	L	Q	K	Q	N	F	P	F	L	A	L	G	R	S	H	L	P	K	P	.	.	.	.	.	.	Y	A	W	F	D	F	D	N	H	A	G	A	S	L	A	V	K	R	L	L	E	L	G	H	Q	R	I	.	.	.	.	.	.	.	A	F	V	S	T	D	A	R	I	S	Y	V	D	Q	R	L	Q	G	Y	V
Template Known Secondary structure						T	T							S					S	S		.	.	.	.	.	.																						T	T			S		.	.	.	.	.	.	.							S		S
Template Predicted Secondary structure																						.	.	.	.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		D	A	L	K	A	A	G	F	P	E	K	Q	I	Y	Q	V	P	T	K	S	N	D	I	P	G	A	F	D	A	A	N	S	M	L	V	Q	H	P	E	V	K	H	W	L	I	V	G	M	N	D	S	T	V	L	G	G	V	R	A	T	E	G	Q	G	F	K	A	A	.	D	I	I	G	I	G	I	N	G	V	D
Query Conservation																																																																						.
Alig confidence																					.																						.	.																										.
Template Conservation																					.																						.	.
Template Sequence		Q	T	X	S	E	A	G	L	X	P	L	A	G	Y	L	Q	K	A	D	.	P	T	R	P	G	G	Y	L	A	A	S	R	L	L	A	L	E	V	P	P	T	.	.	A	I	I	T	D	C	N	X	L	G	D	G	V	A	S	A	L	D	K	A	G	L	L	G	G	E	G	I	S	L	I	A	Y	D	G	L	P
Template Known Secondary structure							T	T					T	T							.	S	S													T	S	S	S			S	.	.					S	S															T		B	S	T	T	S	B						T		S
Template Predicted Secondary structure																					.																						.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		A	V	S	E	L	S	K	A	Q	A	T	G	F	Y	G	S	L	L	P	S	P	.	D	V	H	G	Y	K	S	S	E	M	L	Y	N	W	V	A	K	D	V	E	P	P	K	F	T	E	V	T	D	V	V	L	I	T	R	D	N
Query Conservation																							.
Alig confidence							.	.	.	.	.												.																												.
Template Conservation							.	.	.	.	.																																								.
Template Sequence		D	D	S	L	L	.	.	.	.	.	D	I	A	V	T	P	I	V	Q	N	T	R	T	S	V	G	K	Q	I	A	S	X	I	C	D	L	L	G	G	K	D	P	K	E	L	Q	V	L	W	.	Q	P	E	I	G	E	G	E	T
Template Known Secondary structure		T	T				.	.	.	.	.	S	S										S	S															T	T			G	G	G						.								S	S
Template Predicted Secondary structure							.	.	.	.	.																																								.
Template SS confidence
		227	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions