Job Description P02924 Confidence 39.97% Date Thu Jan 5 10:57:38 GMT 2012 Rank 209 Aligned Residues 133 % Identity 11% Template c3opyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state Resolution 3.05 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																																		.	.	.				.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.
Query Sequence		A	E	N	L	K	L	G	F	L	V	K	Q	P	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	L	G	F	E	V	I	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	P	.	.	.	D	G
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.
Template Conservation
Template Sequence		E	K	R	K	K	I	A	I	I	N	V	G	A	P	A	G	G	M	N	S	A	V	Y	S	M	A	T	Y	C	M	S	R	G	H	V	P	Y	A	I	H	N	G	F	S	G	L	A	R	H	E	S	V	R	S	I	N	W	L	D	I	E	G	W	G	S	L	G	G	S	E	I	G	T	N	R	T	L	P	N	D
Template Known Secondary structure		G	G										S	S			T	T																T							T	T																T	T	T	T	T	T	G	G	G			S		S	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	G	F	V	I	C	T	P	D	P	K	L	G	S	A	I	V	A	K	A	.	.	.	.	.	R	G	Y	D	M	K	V	I	A	V	D	D	Q	F	V	N	A	K	G	K	P	M	D	T	V	P	L	V	M	M	A	A	T	K	I	G	E	R	Q	G
Query Conservation																																					.	.	.	.	.
Alig confidence																																					.	.	.	.	.															.	.	.															.	.	.
Template Conservation																																																								.	.	.															.	.	.
Template Sequence		A	D	I	G	M	I	A	Y	F	F	E	K	Y	G	F	D	G	L	I	L	V	G	G	F	E	A	F	I	S	L	H	Q	L	E	R	A	R	I	N	Y	P	S	L	R	I	P	L	V	L	I	P	A	T	I	.	.	.	S	N	N	V	P	G	T	E	Y	S	L	G	S	D	.	.	.	T	C	L	N	S	F
Template Known Secondary structure		S												T	T		S							S													G	G	G	T		G	G	G		S							B		S	.	.	.	S				T	T		S			B	T			.	.	.
Template Predicted Secondary structure																																																								.	.	.															.	.	.
Template SS confidence
		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.				.	.	.	.	.	.	.	710	.	.	.	.	.	.				.	.	.	720	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	Y	K	E	M	Q	K	R	G	W	D	V	K	E	S	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	Y	C	D	V	I	K	Q	S	A	A	A	T	N	R	V	F	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions