Job Description P02924 Confidence 100.00% Date Thu Jan 5 10:57:38 GMT 2012 Rank 44 Aligned Residues 268 % Identity 11% Template c3o74A_ PDB info PDB header:transcription Chain: A: PDB Molecule:fructose transport system repressor frur; PDBTitle: crystal structure of cra transcriptional dual regulator from2 pseudomonas putida Resolution 2.00 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		N	L	K	L	G	F	L	V	K	Q	P	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	L	G	F	E	V	I	K	I	A	V	P	.	D	G	E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	G	F	V	I	C	T	P	D	P	K	L	G	S	A	I	V	A	K	A	R	G
Query Conservation																																										.
Alig confidence																																										.																														.
Template Conservation																																																																								.
Template Sequence		T	R	T	L	G	F	I	L	P	D	L	E	N	P	S	Y	A	R	I	A	K	Q	L	E	Q	G	A	R	A	R	G	Y	Q	L	L	I	A	S	S	D	D	Q	P	D	S	E	R	Q	L	Q	Q	L	F	R	A	R	R	C	D	A	L	F	V	A	S	C	L	P	P	E	.	D	D	S	Y	R	E	L	Q	D
Template Known Secondary structure										S		T	T																		T	T									T	T															T	T		S										S	S	.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	M	K	V	I	A	V	D	D	Q	F	V	N	A	K	G	K	P	M	D	T	V	P	L	V	M	M	A	A	T	K	I	G	E	R	Q	G	Q	E	L	Y	K	E	M	Q	K	R	G	W	D	V	K	E	S	A	V	M	A	I	T	A	N	E	L	D	T	A	R	R	R	T	T	G	S	M	D	A	L	K
Query Conservation
Alig confidence																		.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Sequence		K	G	L	P	V	I	A	I	D	R	R	L	D	P	A	H	.	.	.	.	.	.	F	C	S	V	I	S	D	D	R	D	A	S	R	Q	L	A	A	S	L	L	S	S	A	P	R	S	I	.	.	.	.	.	.	.	A	L	I	G	A	R	P	E	L	S	V	S	Q	A	R	A	G	G	F	D	E	A	L	Q
Template Known Secondary structure		T	T							S	S				T	T	T	.	.	.	.	.	.																					T	T			S			.	.	.	.	.	.	.							T	T	S														T	T
Template Predicted Secondary structure																		.	.	.	.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	F	P	E	K	Q	I	Y	Q	V	P	T	K	S	N	D	I	P	G	A	F	D	A	A	N	S	M	L	V	Q	H	P	E	V	K	H	W	L	I	V	G	M	N	D	S	T	V	L	G	G	V	R	A	T	E	G	Q	G	F	K	A	A	D	I	I	G	I	G	I	N	G	V	D	A	V	S	E	L
Query Conservation
Alig confidence					.	.	.																																.
Template Conservation					.	.	.																																.
Template Sequence		G	Y	T	.	.	.	G	E	V	R	R	Y	Q	G	E	A	F	S	R	E	C	G	Q	R	L	X	Q	Q	L	I	D	D	L	G	G	L	P	.	D	A	L	V	T	T	S	Y	V	L	L	Q	G	V	F	D	T	L	Q	A	R	P	V	D	S	R	Q	L	Q	L	G	T	F	G	D	N	Q	L	L	D	F	L
Template Known Secondary structure		T			.	.	.	S								S	S	S	S																T	S			.	S					S	S													T	S		G	G	G									S			G	G	G	G	T	S
Template Predicted Secondary structure					.	.	.																																.
Template SS confidence
		207	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	A	Q	A	T	G	F	Y	G	S	L	L	P	S	P	D	V	H	G	Y	K	S	S	E	M	L	Y	N	W	V	A	K	D	V	E	P	P	K	F	T	E	V	T	D	V	V	L	I	T	R	D	N
Query Conservation
Alig confidence		.	.	.	.	.																																							.
Template Conservation		.	.	.	.	.																																							.
Template Sequence		.	.	.	.	.	P	L	P	V	N	A	X	A	Q	Q	H	G	Q	I	A	A	T	A	L	E	L	A	L	A	A	I	E	E	K	R	Y	E	P	G	V	H	A	V	.	G	R	T	F	K	Q	R	I	S
Template Known Secondary structure		.	.	.	.	.	S	S																																					.
Template Predicted Secondary structure		.	.	.	.	.																																							.
Template SS confidence
							283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions