Job Description P02924 Confidence 100.00% Date Thu Jan 5 10:57:38 GMT 2012 Rank 41 Aligned Residues 262 % Identity 15% Template c3k9cA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family protein; PDBTitle: crystal structure of laci transcriptional regulator from rhodococcus2 species. Resolution 2.14 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	G	F	L	V	K	Q	P	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	L	G	F	E	V	I	K	I	A	V	P	D	G	E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	G	F	V	I	C	T	P	D	P	K	L	G	S	A	I	V	A	K	A	R	G	Y	D
Query Conservation
Alig confidence								.																																																													.	.	.
Template Conservation								.																																																													.	.	.
Template Sequence		R	L	L	G	V	V	.	F	E	L	Q	Q	P	F	H	G	D	L	V	E	Q	I	Y	A	A	A	T	R	R	G	Y	D	V	X	L	S	A	V	A	P	S	R	A	E	K	V	A	V	Q	A	L	X	R	E	R	C	E	A	A	I	L	L	G	T	R	F	D	.	.	.	T	D	E	L	G	A	L	A	D	R
Template Known Secondary structure								.			T	T																		T	T									B	T	T	B										T	T	T	T								T					.	.	.									T	T
Template Predicted Secondary structure								.																																																													.	.	.
Template SS confidence
		72	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	I	A	V	D	D	Q	F	V	N	A	K	G	K	P	M	D	T	V	P	L	V	M	M	A	A	T	K	I	G	E	R	Q	G	Q	E	L	Y	K	E	M	Q	K	R	G	W	D	V	K	E	S	A	V	M	A	I	T	A	N	E	L	D	T	A	R	R	R	T	T	G	S	M	D	A	L	K	A	A
Query Conservation
Alig confidence																.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		V	P	A	L	V	V	A	R	A	S	G	L	P	G	.	.	.	.	.	.	V	G	A	V	R	G	D	D	V	A	G	I	T	L	A	V	D	H	L	T	E	L	G	H	R	N	.	.	.	.	.	.	.	.	I	A	H	I	D	G	A	D	A	P	G	G	A	D	R	R	A	G	F	L	A	A	X	D	R	H
Template Known Secondary structure		S						S	S			S	S	T	T	.	.	.	.	.	.	S																					T	T			S	.	.	.	.	.	.	.	.							T	T	S	T	T															T
Template Predicted Secondary structure																.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		G	F	P	E	K	Q	I	Y	Q	V	P	T	K	S	N	D	I	P	G	A	F	D	A	A	N	S	M	L	V	Q	H	P	E	V	K	H	W	L	I	V	G	M	N	D	S	T	V	L	G	G	V	R	A	T	E	G	Q	G	F	K	A	A	.	D	I	I	G	I	G	I	N	G	V	D	A	V	S	E	L	S
Query Conservation																																																																.
Alig confidence							.	.																													.	.																										.																	.
Template Conservation							.	.																													.	.																																											.
Template Sequence		G	L	S	A	S	.	.	A	T	V	V	T	G	G	T	T	E	T	E	G	A	E	G	X	H	T	L	L	E	X	P	T	P	P	T	.	.	A	V	V	A	F	N	D	R	C	A	T	G	V	L	D	L	L	V	R	S	G	R	D	V	P	A	D	I	S	V	V	G	Y	D	D	S	R	L	A	R	I	P	.
Template Known Secondary structure		T		G	G	G	.	.								S	S													T	S	S	S			S	.	.					S	S														T	T			T	T	T	T										T	T	T	T		T	.
Template Predicted Secondary structure							.	.																													.	.																																											.
Template SS confidence
		214	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	Q	A	T	G	F	Y	G	S	L	L	P	S	P	D	V	H	G	Y	K	S	S	E	M	L	Y	N	W	V	A	K	D	V	E	P	P	K	F	T	E	V	T	D	V	V	L	I	T	R	D	N	F
Query Conservation
Alig confidence		.	.	.	.																																	.	.	.
Template Conservation		.	.	.	.																																	.	.	.
Template Sequence		.	.	.	.	H	V	Q	X	T	T	I	S	Q	D	A	T	H	X	A	E	A	A	V	D	G	A	L	A	Q	I	S	G	D	K	A	V	.	.	.	D	L	V	L	A	P	H	L	V	R	R	A	T	T
Template Known Secondary structure		.	.	.	.	T	T																										T					.	.	.												S	S
Template Predicted Secondary structure		.	.	.	.																																	.	.	.
Template SS confidence
						289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions