Job Description P02924 Confidence 85.22% Date Thu Jan 5 10:57:38 GMT 2012 Rank 131 Aligned Residues 81 % Identity 16% Template c3k2dA_ PDB info PDB header:immune system Chain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component; PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus Resolution 2.60 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	A	M	A	E	N	L	K	L	G	F	L	V	K	Q	P	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	L	G	F	E	V	I	K	I	A	V	P	D	G	E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	G	F	V	I	C	T	P	D	P	K	L	G	S	A	I	V
Query Conservation
Alig confidence															.																	.	.	.																	.	.	.																				.	.	.	.	.
Template Conservation															.																	.	.	.																	.	.	.																				.	.	.	.	.
Template Sequence		G	H	M	D	T	S	K	V	K	V	G	V	M	.	A	G	A	E	A	Q	V	A	E	V	A	A	K	V	A	K	.	.	.	E	K	Y	G	L	D	V	E	L	V	T	F	T	D	Y	V	.	.	.	T	P	N	A	A	L	D	D	G	S	I	D	M	N	A	F	Q	H	K	.	.	.	.	.	P	Y	L	D
Template Known Secondary structure				S											.	T	T															.	.	.													S		T	T	.	.	.	S								T	S		S								.	.	.	.	.
Template Predicted Secondary structure															.																	.	.	.																	.	.	.																				.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	R	G	Y	D	M	K	V	I	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	V	E	D	R	D	Y	K	L	T	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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