Job Description P02924 Confidence 100.00% Date Thu Jan 5 10:57:38 GMT 2012 Rank 39 Aligned Residues 259 % Identity 15% Template c3egcF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:putative ribose operon repressor; PDBTitle: crystal structure of a putative ribose operon repressor from2 burkholderia thailandensis Resolution 2.35 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		E	N	L	K	L	G	F	L	V	K	Q	P	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	L	G	F	E	V	I	K	I	A	V	P	.	D	G	E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	G	F	V	I	C	T	P	D	P	K	L	G	S	A	I	V	A	K	A	R
Query Conservation																																											.
Alig confidence																																											.																													.	.
Template Conservation																																																																								.	.
Template Sequence		R	S	N	V	V	G	L	I	V	S	D	I	E	N	V	F	F	A	E	V	A	S	G	V	E	S	E	A	R	H	K	G	Y	S	V	L	L	A	N	T	A	E	D	I	V	R	E	R	E	A	V	G	Q	F	F	E	R	R	V	D	G	L	I	L	A	P	S	E	G	E	.	.	H	D	Y	L	R	T	E	L
Template Known Secondary structure											S		T	T	S																	T	T									T	T															T	T		S								S	S		.	.							S	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	D	M	K	V	I	A	V	D	D	Q	F	V	N	A	K	G	K	P	M	D	T	V	P	L	V	M	M	A	A	T	K	I	G	E	R	Q	G	Q	E	L	Y	K	E	M	Q	K	R	G	W	D	V	K	E	S	A	V	M	A	I	T	A	N	E	L	D	T	A	R	R	R	T	T	G	S	M	D	A	L
Query Conservation
Alig confidence												.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Sequence		P	K	T	F	P	I	V	A	V	N	.	.	.	.	.	.	R	E	L	R	I	P	G	C	G	A	V	L	S	E	N	V	R	G	A	R	T	A	V	E	Y	L	I	A	R	G	H	T	R	I	.	.	.	.	.	.	.	G	A	I	V	G	S	A	G	L	M	T	S	R	E	R	L	K	G	F	R	A	A	M
Template Known Secondary structure			T	T	S						S	.	.	.	.	.	.	S					T	T																						T	T			S		.	.	.	.	.	.	.					S	S	T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		K	A	A	G	F	P	E	K	Q	I	Y	Q	V	P	T	K	S	N	D	I	P	G	A	F	D	A	A	N	S	M	L	V	Q	H	P	E	V	K	H	W	L	I	V	G	M	N	D	S	T	V	L	G	G	V	R	A	T	E	G	Q	G	F	K	A	A	.	D	I	I	G	I	G	I	N	G	V	D	A	V	S
Query Conservation																																																																			.
Alig confidence																		.	.	.	.	.	.	.																.	.																										.
Template Conservation																		.	.	.	.	.	.	.																.	.
Template Sequence		S	A	A	G	L	P	V	R	Q	E	W	I	A	A	N	G	.	.	.	.	.	.	.	R	D	G	A	I	K	V	L	T	G	A	D	R	P	T	.	.	A	L	L	T	S	S	H	R	I	T	E	G	A	M	Q	A	L	N	V	L	G	L	R	Y	G	P	D	V	E	I	V	S	F	D	N	L	P	W	M	A
Template Known Secondary structure				T	T					G	G	G						.	.	.	.	.	.	.									T	S	T	T			S	.	.					S	S														T	T			B	T	T	T	B						S			G	G	G	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.																.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	S	K	A	Q	A	T	G	F	Y	G	S	L	L	P	S	P	D	V	H	G	Y	K	S	S	E	M	L	Y	N	W	V	A	K	D	V	E	P	P	K	F	T	E	V	T	D	V	V	L	I	T
Query Conservation
Alig confidence				.	.	.	.	.																																			.	.
Template Conservation				.	.	.	.	.																																			.	.
Template Sequence		F	L	.	.	.	.	.	D	P	P	L	P	V	V	E	Q	P	T	R	R	I	G	Q	E	A	M	R	M	L	I	H	M	I	E	G	T	G	N	A	T	E	.	.	M	R	L	Q	T	R	F	V	T
Template Known Secondary structure		G	S	.	.	.	.	.	S	S																										T	S	S					.	.
Template Predicted Secondary structure				.	.	.	.	.																																			.	.
Template SS confidence
		288	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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