Job Description P02924 Confidence 65.24% Date Thu Jan 5 10:57:38 GMT 2012 Rank 162 Aligned Residues 88 % Identity 17% Template c3c9hB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter, substrate binding protein; PDBTitle: crystal structure of the substrate binding protein of the abc2 transporter from agrobacterium tumefaciens Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		A	L	A	A	I	G	L	A	A	V	M	S	Q	S	A	M	A	E	N	L	K	L	G	F	L	V	K	Q	P	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	L	.	G	F	E	V	I	K	I	A	V	P	D	G	E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	G	F	V
Query Conservation																																																		.
Alig confidence																								.	.	.																			.	.	.			.
Template Conservation																								.	.	.																			.	.	.
Template Sequence		A	L	A	Q	V	A	V	F	P	A	L	S	G	K	T	D	A	Q	T	L	V	V	.	.	.	Y	S	S	L	D	E	P	L	A	T	P	M	I	E	G	F	Q	K	.	.	.	A	N	P	D	I	A	V	H	Y	E	D	M	L	T	G	E	I	Y	D	R	I	V	K	E	T	D	A	G	K	K	T	A	D	F
Template Known Secondary structure												T	T			T	T							.	.	.				S															.	.	.			T	T																							T	T			B		S
Template Predicted Secondary structure																								.	.	.																			.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	T	P	D	P	K	L	G	S	A	I	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	S	S	A	M	D	L	Q	V	K	L	S	N	D
Template Known Secondary structure					S											T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions