Return to main results Retrieve Phyre Job Id

Job DescriptionP02924
Confidence92.24%DateThu Jan 5 10:57:38 GMT 2012
Rank113Aligned Residues106
% Identity20%Templatec2xecD_
PDB info PDB header:isomeraseChain: D: PDB Molecule:putative maleate isomerase; PDBTitle: nocardia farcinica maleate cis-trans isomerase bound to2 tris
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10 .........20.........30.........40.........50.........60.
Predicted Secondary structure 
............












........
Query SS confidence 








. . . . . . . . . . . .


















































. . . . . . . .
Query Sequence  HKFTKALAA. . . . . . . . . . . . IGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKI. . . . . . . .
Query Conservation   
      
............          
      

 
       
      
    
   
      ........
Alig confidence 








............






















.....






















........
Template Conservation        
         
 



   
   

 


  



 

.....
   
           
 

     
     
Template Sequence  HRVESAVAEQLATGGSQALVRSSAGALVEGLRALDAQRVALVTP. . . . . YMRPLAEKVVAYLEAEGFTISDWRALEVADN
Template Known Secondary structure  TT


T
S
.....S
TT




B
Template Predicted Secondary structure 












.....












Template SS confidence 















































































   8990.........100.........110.........120.........130.. .......140.........150.........160...
 
   62.......70.........80....... ..90.........100.........110..
Predicted Secondary structure  ...






.











Query SS confidence  . . .

























.
























Query Sequence  . . . AVPDGEKTLNAIDSLAASGAKGFVIC. TPDPKLGSAIVAKARGYDMKVIAVD
Query Conservation  ...   
   
   
  

   





 .                  
 

  
Alig confidence  ...

























.
























Template Conservation    

 
    
            


 

 





  

  

  

 





Template Sequence  TEVGCIPGEQVMAAARSLDLSEVDALVISCCVQMPSLPLVETAEREFGIPVLSAA
Template Known Secondary structure  T

S

TT
SS
SSS

GGGTS
Template Predicted Secondary structure 



















Template SS confidence 






















































   164.....170.........180.........190.........200.........210........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions