Job Description P02924 Confidence 36.73% Date Thu Jan 5 10:57:38 GMT 2012 Rank 220 Aligned Residues 88 % Identity 3% Template c2w42A_ PDB info PDB header:protein/dna complex Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the structure of a piwi protein from archaeoglobus fulgidus2 complexed with a 16nt dna duplex. Resolution 1.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.																														.
Query SS confidence																																.	.	.	.	.	.																														.
Query Sequence		E	N	L	K	L	G	F	L	V	K	Q	P	E	E	P	W	F	Q	T	E	W	K	F	A	D	K	A	G	K	D	.	.	.	.	.	.	L	G	F	E	V	I	K	I	A	V	P	D	G	E	K	T	L	N	A	I	D	S	L	A	A	S	G	A	K	.	G	F	V	I	C	T	P	D	P	K	L	G	S	A
Query Conservation																																.	.	.	.	.	.																														.
Alig confidence																																.	.	.	.	.	.																														.
Template Conservation
Template Sequence		K	Y	N	Q	I	A	L	I	H	N	N	Q	F	S	S	L	I	N	Q	L	K	S	Q	I	S	S	K	I	D	E	V	W	H	I	H	N	I	N	I	S	E	F	I	Y	D	S	P	H	F	D	S	I	K	S	Q	V	D	N	A	I	D	T	G	V	D	G	I	M	L	V	L	P	E	Y	N	T	P	L	Y	Y
Template Known Secondary structure		S	S	S							S		T	T																		T	T				S									S	S	S	S																	S							S	S
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	K	A	R	G	Y	D	M	K	V	I	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	K	S	Y	L	I	N	S	I	P	S	Q	F	M
Template Known Secondary structure									T	T	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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