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Job DescriptionP02924
Confidence74.46%DateThu Jan 5 10:57:38 GMT 2012
Rank148Aligned Residues217
% Identity13%Templatec2e4wA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:metabotropic glutamate receptor 3; PDBTitle: crystal structure of the extracellular region of the group ii2 metabotropic glutamate receptor complexed with 1s,3s-acpd
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30..... ....40.........50.... .... .60.........70.........80.
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Query Sequence  NLKLGFLVKQP. . . . . . . . . . . . EEPWFQTEWKFADKAGKDL. . . . . . . . GFEV. . . IKIAVPDGEKTLNAIDSLAASGA
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Template Sequence  DLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDNYLLPGVKLGVHILDTCSRDTYALEQSLEFVRASL
Template Known Secondary structure  S



TT
S
TTTTT
TTSSTT


TT
TT
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   38.40.........50.........60.........70.........80.........90.........100.........110.......
 
   82.......90.........100.........110 .........120.........130.........140.........150......
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Query Sequence  . . . . KGFVICTPDPKLGSAIVAKARGYDMKVIA. VDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVK
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Template Sequence  IPLLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTY. . . . .
Template Known Secondary structure 




SSGGGT

SS


GGGG
TTT
TTSS

TT

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   138.140.........150.........160.........170.........180.........190.........200.........210..
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  ESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGV
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Template Sequence  . . VSTVA. . SEGDYGETGIEAFEQEARLRNICIATAEKVGRSNIRKSYDSVIRELLQKPNARV. . . VVLFMRSDDSRELI
Template Known Secondary structure  ....SSTTTTT

TT

T
TT

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   213.... ..220.........230.........240.........250.........260.........270. ........280.....
 
   237..240.........250......
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Query Sequence  RATEGQGFKAADIIGIGING
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Template Sequence  AAANRVNA. . . SFTWVASDG
Template Known Secondary structure  TT
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TT
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   286...290... ......300..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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