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Job DescriptionP02924
Confidence84.59%DateThu Jan 5 10:57:38 GMT 2012
Rank132Aligned Residues93
% Identity17%Templatec2dgdD_
PDB info PDB header:lyaseChain: D: PDB Molecule:223aa long hypothetical arylmalonate decarboxylase; PDBTitle: crystal structure of st0656, a function unknown protein from2 sulfolobus tokodaii
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60. ........70......... 80.
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Query Sequence  AVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKI. . . . . . . . . . . AVPDGEKTLNAIDSLAAS. . GA
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Template Sequence  SVYELLKKLNVRKLWIGTP. . . . . YIKERTLEEVEWWRNKGFEIVGYDGLGKIRGIDISNTPIFTIYRLVKRHLNEVLKA
Template Known Secondary structure  TT

S.....S
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ST

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   98.100.........110...... ...120.........130.........140.........150.........160.........170..
 
   82.......90.........100.........110..
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Query Sequence  KGFVICTPDPKLGSAIVAKARGYDMKVIAVD
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Template Sequence  DAVYIACTALSTYEAVQYLHEDLDXPVVSEN
Template Known Secondary structure  S

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   173......180.........190.........200...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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