Return to main results Retrieve Phyre Job Id

Job DescriptionP32687
Confidence12.28%DateThu Jan 5 11:50:11 GMT 2012
Rank9Aligned Residues19
% Identity32%Templated1v9pa3
SCOP infoATP-grasp DNA ligase/mRNA capping enzyme, catalytic domain Adenylation domain of NAD+-dependent DNA ligase
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80...... ...90... .....
Predicted Secondary structure 

..

..


Query SS confidence 






. .






. .




Query Sequence  DQATLVT. . QHGRLVK. . TLLGG
Query Conservation 
  



..
 




..
 


Alig confidence 






..






..




Template Conservation 

 

 
 
  
 

 
 




Template Sequence  DGLSVNLYYEEGVLVFGATRGDG
Template Known Secondary structure 
STT
TTS
Template Predicted Secondary structure 






Template SS confidence 






















   120.........130.........140..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions