Job Description P32687 Confidence 6.43% Date Thu Jan 5 11:50:11 GMT 2012 Rank 28 Aligned Residues 137 % Identity 12% Template c3o44G_ PDB info PDB header:toxin Chain: G: PDB Molecule:hemolysin; PDBTitle: crystal structure of the vibrio cholerae cytolysin (hlya) heptameric2 pore Resolution 2.88 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	M	Q	L	N	G	G	P	Q	L	F	V	V	L	A	F	A	E	D	G	Q	Q	K	W	V	T	Q	D	Q	A	T	L	V	T	Q	H	G	R	L	V	K	T	L	L	G	G	D	N	L	I	E	V	N	N	L	A	A	D	P	L	I	K	P	A	Q	I	V	D	G	A	S	W	T	R	T	M	G	W	T
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		A	Y	T	D	V	F	N	A	Q	E	S	S	P	I	L	G	Y	T	Q	G	K	M	N	Q	Q	R	V	G	Q	D	N	R	L	Y	V	R	A	G	A	A	I	D	A	L	G	S	A	S	D	L	L	V	G	G	N	G	G	S	L	S	S	V	D	L	S	G	V	K	S	I	T	A	T	S	G	D	F	Q	Y	.
Template Known Secondary structure			B			T	T														S									T	T								S	S	S						S	S	T	T						S		S								T	T												S	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	Q	Q	V	R	Y	A	T	A	R	S	V	F	K	W	D	G	T	D	T	V	K	V	G	S	D	E	T	P	V	R	V	L	D	E	E	V	S	T	D	Q	A	R	W	H	N	R	Y	W	I	D	S	E	G	Q	I	R	Q	S	E	Q
Query Conservation
Alig confidence										.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		G	G	Q	Q	L	V	A	L	.	.	.	.	T	F	T	Y	Q	D	G	R	Q	Q	T	V	G	S	K	A	Y	V	T	N	A	H	E	D	R	F	D	L	P	D	A	A	K	I	T	Q	L	K	I	W	A	D	D	W	L	V	K	G	V	Q
Template Known Secondary structure		S	S							.	.	.	.					T	T	S								S	S	S													T	T												S	S
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		655	.	.	.	.	660	.	.					.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions