Job Description P32687 Confidence 5.97% Date Thu Jan 5 11:50:11 GMT 2012 Rank 32 Aligned Residues 39 % Identity 18% Template c2jkbA_ PDB info PDB header:lyase Chain: A: PDB Molecule:sialidase b; PDBTitle: crystal structure of streptococcus pneumoniae nanb in2 complex with 2,7-anhydro-neu5ac Resolution 1.54 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80										.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.
Query Sequence		G	V	Q	L	T	D	D	D	I	Q	N	M	P	Y	A	S	Q	Y	M	Q	L	N	G	G	P	Q	L	F	V	V	L	A	F	A	E	D	G	Q	Q	K	W	V	T	Q	D	.	.	.	.	.	.	.	.	.	Q	A	T	L	V	T	Q	H	G	R	L	V	K
Query Conservation																																															.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	A	I	S	D	Q	E	V	S	T	I	P	L	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	Q	L	I	F	Q	S	G	D	S	T	Q	A	N	Y	F	R	I	P	T	L	Y	T	L	S	S	G	R	V	L	S
Template Known Secondary structure		S	S									T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		B		S	S		T	T	S	T	T			S											T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.																				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions