Return to main results Retrieve Phyre Job Id

Job DescriptionP39276
Confidence1.45%DateThu Jan 5 11:58:45 GMT 2012
Rank66Aligned Residues21
% Identity5%Templated1k6ya1
SCOP infoDNA/RNA-binding 3-helical bundle N-terminal Zn binding domain of HIV integrase N-terminal Zn binding domain of HIV integrase
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50..
Predicted Secondary structure 



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Query Sequence  ILYLTHQLGFDDNHAISLFSA
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Template Sequence  WRAMASDFNLPPVVAKEIVAS
Template Known Secondary structure  T

Template Predicted Secondary structure 


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   1920.........30.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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