Job Description P39276 Confidence 10.34% Date Thu Jan 5 11:58:45 GMT 2012 Rank 7 Aligned Residues 226 % Identity 7% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	P	S	Q	P	R	A	I	Y	Y	I	V	A	I	Q	I	W	E	Y	F	S	F	Y	G	M	R	A	L	L	I	L	Y	L	T	H	Q	L	G	F	D	D	N	H	A	I	S	L	F	S	A	Y	A	S	L	V	Y	V	T	P	I	L	G	G	W	L	A	D	R	L	L	G	N	R	T	A	V	I	A	G
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	.	.	.	.	.	.	.	.	.	.	A	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D
Template Known Secondary structure																														.	.	.	.	.	.	.	.	.	.	T	T	S		G	G	G																											T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220											.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	M	T	L	G	H	V	V	L	G	I	D	T	N	S	T	F	S	L	Y	L	A	L	A	I	I	I	C	G	Y	G	L	F	K	S	N	I	S	C	L	L	G	E	L	Y	D	E	N	D	H	R	R	D	G	G	F	S	L	L	Y	A	A	G	N	I	G	S	I	A	A	P	I	A	C	G	L	A	A
Query Conservation
Alig confidence												.																																							.
Template Conservation												.																																							.
Template Sequence		M	A	N	A	A	L	A	G	G	V	.	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	.	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P
Template Known Secondary structure						T	T					.			T	T	T	T	T	T	S																						T								.		S					T	T						T	T														S	T
Template Predicted Secondary structure												.																																							.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	Y	G	W	H	V	G	F	A	L	A	G	G	G	M	F	I	G	L	L	I	F	L	S	G	H	R	H	F	Q	S	T	R	S	M	D	K	K	A	L	T	S	V	K	F	A	L	P	V	W	S	W	L	V	V	M	L	C	L	A	P	V	F	F	T	L	L	L	E	N	D	W	S	G	Y	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E	H	K	A	E	R	L	V	L	E	A	K	T	E	I	Q	G	L	K	N	R	I	D	A	A	V
Template Known Secondary structure		T																													T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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