Job Description P0AFI5 Confidence 100.00% Date Thu Jan 5 11:26:25 GMT 2012 Rank 26 Aligned Residues 224 % Identity 19% Template d2cc1a1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.13

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	.	.	.	.	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L
Query Conservation																																								.	.	.	.
Alig confidence														.																										.	.	.	.																	.
Template Conservation														.																																														.
Template Sequence		G	L	Y	A	A	N	L	Q	S	G	R	R	.	I	T	H	R	P	D	E	M	F	A	M	C	S	T	F	K	G	Y	V	A	A	R	V	L	Q	M	A	E	H	G	E	I	S	L	D	N	R	V	F	V	D	A	D	A	L	.	V	P	N	S	P	V	T	E	A	R	A	G	A	E	M	T	L	A	E	L	C
Template Known Secondary structure								T	T	T				.				S	T	T	S					G	G	G															T	T	S	S		T	T							G	G	G		.		S	S						T	T	T	T	S
Template Predicted Secondary structure														.																																														.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	.	.	.	.	.	.	.	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	P	L
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		Q	A	A	L	Q	R	S	D	N	T	A	A	N	L	L	L	K	T	I	G	G	.	.	.	.	.	P	A	A	V	T	A	F	A	R	S	V	G	D	E	R	T	R	L	D	R	W	E	V	E	L	N	S	A	I	P	G	D	P	R	D	T	S	T	P	A	A	L	A	V	G	Y	R	A	I	L	A	G	D	A
Template Known Secondary structure							S														T		.	.	.	.	.											T	T			S					S		T	T	G	G	G	G			T	T			T	T																	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.											.
Query SS confidence																																																												.											.
Query Sequence		I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	.	N	N	K	P	V	A	L	V	V	M	.	D	A	F	G	K	Y	T	H	F	A
Query Conservation																																																												.											.
Alig confidence																		.	.	.	.	.	.													.																								.											.
Template Conservation																		.	.	.	.	.	.													.
Template Sequence		L	S	P	P	Q	R	G	L	L	E	D	W	M	R	A	N	.	.	.	.	.	.	Q	T	S	S	M	R	A	G	L	P	E	G	.	W	T	T	A	D	K	T	G	S	G	D	Y	G	S	T	N	D	A	G	I	A	F	G	P	D	G	Q	R	L	L	L	V	M	M	T	R	S	Q	A	H	D	P	K	A	E
Template Known Secondary structure		S														T		.	.	.	.	.	.	S			S	G	G	G	G	S		T	T	.											S	T	T											T	T	S												S	S	S		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.													.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		269	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	S	R	L	R	T	W	I	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	R	P	L	I	G	E	L	T	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions