Job Description P0AFI5 Confidence 98.29% Date Thu Jan 5 11:26:25 GMT 2012 Rank 81 Aligned Residues 134 % Identity 18% Template d2c5wb1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.55

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		42	.	.	.	.	.	.	.	50	.	.	.	.																.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	.	A	M	V	V	L	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		A	S	T	I	V	D	V	S	N	G	K	V	I	A	Q	L	G	A	R	H	Q	S	S	N	V	S	F	G	I	N	Q	A	V	E	T	N	R	D	W	G	S	T	M	K	P	I	T	D	Y	A	P	A	L	E	Y	G	V	Y	E	S	T	A	T	I	V	H	D	E	P	Y	N	Y	P	G	T	N	T	P	V	Y
Template Known Secondary structure								T	T	T		B								S	S						T	T				T	T	T				S			G	G	G						T							T	T	S		S	B	S	S						S	S		B		T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		106	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.								.	.
Predicted Secondary structure						.	.	.	.																																																																.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																																																																.	.	.	.	.	.	.
Query Sequence		R	L	N	S	.	.	.	.	E	I	S	R	K	D	M	L	L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	S	V	H	N	V	.	.	.	.	.	.	.	S	T
Query Conservation						.	.	.	.																																																																.	.	.	.	.	.	.
Alig confidence						.	.	.	.							.	.	.	.																			.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Conservation																.	.	.	.																			.	.	.	.	.	.
Template Sequence		N	W	D	R	G	Y	F	G	N	I	T	L	Q	Y	.	.	.	.	A	L	Q	Q	S	R	N	V	P	A	V	E	T	L	N	K	V	G	.	.	.	.	.	.	L	N	R	A	K	T	F	L	N	G	L	G	I	D	Y	P	S	I	H	Y	S	N	A	I	S	S	N	T	T	E	S	D	K	K	Y	G	A	S
Template Known Secondary structure			T	T	S											.	.	.	.				T	T														.	.	.	.	.	.										T	T	T		B		S	S			G	G	G	G	S					S	S			S	S	B	S
Template Predicted Secondary structure																.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.					.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.							.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	D	L	T	K	L	L	I	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	K	M	A	A	A	Y	A	A	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions