Job Description P0AFI5 Confidence 98.73% Date Thu Jan 5 11:26:25 GMT 2012 Rank 68 Aligned Residues 225 % Identity 19% Template d1yqsa1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.05

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	.	.	.	.	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence													.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.											.	.	.								.
Template Conservation													.	.	.																																																								.	.	.								.
Template Sequence		G	A	P	G	A	M	V	R	V	D	D	.	.	.	N	G	T	I	H	Q	L	S	E	G	V	A	D	R	A	T	G	R	A	I	T	T	T	D	R	F	R	V	G	S	V	T	K	S	F	S	A	V	V	L	L	Q	L	V	D	E	G	K	L	D	L	D	A	S	V	.	.	.	N	T	Y	L	P	G	L	.
Template Known Secondary structure		T		S									.	.	.	T	T									B	S		T	T	T			B			T	T		B				G	G	G															T	T	S			T	T	S	B		.	.	.				S	T	T		.
Template Predicted Secondary structure													.	.	.																																																								.	.	.								.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																																																			.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	L	A	L	M	S	S	E	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	P	D	D	R	I	T	V	R	Q	V	M	S	H	R	S	G	L	Y	D	Y	T	N	D	M	F	A	Q	T	V	P	G	F	E	S	V	R	N	K	V	F	S	Y	Q	D	L	I	T	L	S	L	K	H	G	V	T	N	A	P	G	A	A	Y	S	Y	S	N	T	N	F	V	V	A	G
Template Known Secondary structure		.	.	.	.	.	.	S	S		T	T		B						T	T		S					T					T	S	S									T	T														T	S			S	S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																																	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	S	V	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	T	A	R	D
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		M	L	I	E	K	L	T	G	H	S	V	A	T	E	Y	.	.	Q	N	R	I	F	T	P	L	N	L	T	D	T	F	Y	V	H	P	D	T	V	I	P	G	T	H	A	N	G	Y	L	T	P	D	E	A	G	G	A	L	V	D	S	T	E	Q	T	V	S	W	A	Q	S	A	G	A	V	I	S	S	T	Q	D
Template Known Secondary structure									S	S							.	.				T	T	T	T	T	T		T	T		B			T	T						S	S	B								S	S	T	T												T	T	T	G	G	G	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		L	T	K	L	L	I	A	S	K	Q	Y	P	L	I	G	Q	.	.	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A	L
Query Conservation																		.	.
Alig confidence																		.	.																										.	.	.	.														.	.
Template Conservation																																													.	.	.	.														.	.
Template Sequence		L	D	T	F	F	S	A	L	M	S	G	Q	L	M	S	A	A	Q	L	A	Q	M	Q	Q	W	T	T	V	N	S	T	Q	G	Y	G	L	G	L	R	R	R	D	L	.	.	.	.	S	C	G	I	S	V	Y	G	H	T	G	T	V	.	.	Q	G	Y	Y	T	Y	A	F	A	S	K	D	G	K	R	S	V	T
Template Known Secondary structure											T	T		S	S									T							T	T					S	S							.	.	.	.	T	T	S											.	.	T	T									T	T	S	S
Template Predicted Secondary structure																																													.	.	.	.														.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	M	D	A	F	G	K	Y	T	H	F	A	D	A	S	R	L	R	T	W	I	E	T	G	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	N	T	S	N	N	V	N	V	L	N	T	M	A	R	T	L	E	S	A	F	C	G	K	P
Template Known Secondary structure					S			S																	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions