Job Description P0AFI5 Confidence 99.64% Date Thu Jan 5 11:26:25 GMT 2012 Rank 48 Aligned Residues 198 % Identity 14% Template d1xa1a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.80

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																						.
Query SS confidence																			.	.	.																						.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	.	.	.	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	.	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L
Query Conservation																			.	.	.																						.
Alig confidence														.					.	.	.																						.																							.	.	.	.	.	.										.
Template Conservation														.																																																				.	.	.	.	.	.										.
Template Sequence		S	F	V	M	Y	S	M	K	K	D	K	Y	.	Y	I	Y	N	E	K	E	S	R	K	R	Y	S	P	N	S	T	Y	K	I	Y	L	A	M	F	G	L	D	R	H	I	I	N	D	E	N	S	R	M	S	W	N	H	K	H	Y	P	F	D	A	W	.	.	.	.	.	.	N	K	E	Q	D	L	N	T	A	.
Template Known Secondary structure								T	T	T	T			.				S					T						G	G	G	G											T	T	S	S		S	S				B				S				S	S	G	G	G	.	.	.	.	.	.	S	S		B						.
Template Predicted Secondary structure														.																																																				.	.	.	.	.	.										.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.
Predicted Secondary structure																																																			.	.																						.	.	.
Query SS confidence																																																			.	.																						.	.	.
Query Sequence		L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	.	.	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	.	.	.	Y	P	L	I	G
Query Conservation																																																			.	.																						.	.	.
Alig confidence		.	.	.																		.	.	.	.	.	.																								.	.																						.	.	.
Template Conservation		.	.	.																		.	.	.	.	.	.
Template Sequence		.	.	.	M	Q	N	S	V	N	W	Y	F	E	R	I	S	D	Q	I	P	.	.	.	.	.	.	K	N	Y	T	A	T	Q	L	K	Q	L	N	Y	G	N	K	N	L	G	S	Y	K	S	Y	W	M	E	D	S	L	K	I	S	N	L	E	Q	V	I	V	F	K	N	M	M	E	N	H	F	S	K	K	A	K
Template Known Secondary structure		.	.	.				T											T	S		.	.	.	.	.	.												T		T	T				T	T	S	S	S	T	T	S	S	S	S																				S
Template Predicted Secondary structure		.	.	.																		.	.	.	.	.	.
Template SS confidence
					104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.																		.	.	.
Query SS confidence																																																			.	.	.	.																		.	.	.
Query Sequence		Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	.	.	.	.	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	V	M	.	.	.	D	A	F	G	K	Y	T
Query Conservation																																																			.	.	.	.																		.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.																		.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	L	S	S	S	L	L	I	K	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	Y	E	L	Y	G	K	T	G	T	G	I	V	N	G	K	Y	N	N	G	W	F	V	G	Y	V	I	T	N	H	D	K	Y	Y	F	A	T	H	L	S	D	G	K	P	S	G	K	N
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S													T	T														S	S												S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.																				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	A	D	A	S	R	L	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	L	I	S	E	K	I	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions