Job Description P0AFI5 Confidence 99.95% Date Thu Jan 5 11:26:25 GMT 2012 Rank 45 Aligned Residues 227 % Identity 20% Template d1w5da1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like Dac-like Resolution 2.1

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	A	R	L	P	.	.	.	L	D	E	K	L	K	V	D	I	S	Q	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	T	V	R	S	A	E	T	G	A	V	L	Y	E	H	S	G	D	T	R	M	R	P	A	S	S	L	K	L	L	T	A	A	A	A	L	S	V	L	G	E	N	Y	S	F	T	T	E	V	R	T	D	G	T	L	K	G	K	K	L	N	G	N	L	Y	L	K	G	K	G	D	P	T	L	L	P	S	D	F
Template Known Secondary structure								T	T	T								S	T	T	S		B			G	G	G	G														T	T										S	S			S	S	S				S								S		T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	M	A	E	I	L	K	H	S	G	V	K	V	I	K	G	N	L	I	G	D	D	T	W	H	D	D	M	R	L	S	P	D	M	P	W	S	D	E	Y	T	Y	Y	G	A	P	I	S	A	L	T	A	S	P	N	E	D	Y	D	A	G	T	V	I	V	E	V	T	P	N	Q	K	E	G	E	E	P	A	V
Template Known Secondary structure											T	T					S	S							T	T	S		S			S		T	T			G	G	G	T	T	B	G	G	G					S	S				S	S	T	T			T	T										S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	S	P	K	T	D	Y	I	T	I	K	N	D	A	K	T	T	A	A	G	S	E	K	D	L	T	I	E	R	E	H	G	T	N	T	I	T	I	E	G	S	V	P	V	D	A	N	K	T	K	E	W	I	S	V	W	E	P	A	G	Y	A	L	D	L	F	K	Q	S	L	K	K	Q	G	I	T	V	K	G
Template Known Secondary structure					S			S	S	S											T	T	S										T	T	S	S										S	S											S	S																T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
							97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.
Predicted Secondary structure		.	.	.	.	.																																										.	.	.	.	.	.																										.	.
Query SS confidence		.	.	.	.	.																																										.	.	.	.	.	.																										.	.
Query Sequence		.	.	.	.	.	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	.	.	.	.	.	.	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	.	.	E
Query Conservation		.	.	.	.	.																																										.	.	.	.	.	.																										.	.
Alig confidence		.	.	.	.	.																																										.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		D	I	K	T	G	E	A	P	S	S	S	D	V	L	L	S	H	R	S	M	P	L	S	K	L	F	V	P	F	M	K	L	S	N	N	G	H	A	E	V	L	V	K	E	M	G	K	V	K	K	G	E	G	S	W	E	K	G	L	E	V	L	N	S	T	L	P	E	F	G	V	D	S	K	S	L	V	L	R	D
Template Known Secondary structure										T	T	S																						T																	T	S			S												G	G	G	G	T			G	G	G		B		S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		P	T	G	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	P	L	I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	.	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L
Query Conservation																																														.
Alig confidence																																				.	.	.	.							.																														.
Template Conservation																																				.	.	.	.																																					.
Template Sequence		G	S	G	I	S	H	I	D	A	V	S	S	D	Q	L	S	Q	L	L	Y	D	I	Q	D	Q	S	W	F	S	A	Y	L	N	S	.	.	.	.	L	P	V	A	G	N	P	D	R	M	V	G	G	T	L	R	N	R	M	K	G	T	P	A	Q	G	K	V	R	A	K	T	G	S	L	S	.	T	V	S	S	L
Template Known Secondary structure		S	S	S			T	T		B	B													T	T	S	T	T								.	.	.	.	S		B	T	T		S	S					G	G	G	T	T	S	S	T	T	S	T	T	T	T	T									T	.	T
Template Predicted Secondary structure																																				.	.	.	.																																					.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380					.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.
		243	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		V	M	R	T	V	.	I	N	N	K	P	V	A	L	V	V	M	D	A	F	G	K	Y	T	H	F	A	D	A	S	R	L	R	T
Query Conservation							.
Alig confidence							.																				.	.
Template Conservation																											.	.
Template Sequence		S	G	Y	A	E	T	K	S	G	K	K	L	V	F	S	I	L	L	N	G	L	I	D	E	E	.	.	D	G	K	D	I	E	D
Template Known Secondary structure								S	S	S											S		S	S	G	G	.	.	G
Template Predicted Secondary structure																											.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions