|   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
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80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
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|  |  |  |  |
|  |  |  | . | . |
Query SS confidence |   |
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| . |
. |
. |
. |
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| . |
. |
Query Sequence |   |
P | Q | A | V | A | K | T | A | A | A | T | T | A | S | Q | P | E | I | A | S | G | S | A | M | I | V | D | L | N | T | N | K | V | I | Y | S | N | H | P | D | L | V | R | P | I | A | S | I | S | K | L | M | T | A | M | V | V | L | D | . |
. |
. |
. |
A | R | L | P | L | D | E | K | L | K | V | D | I | S | Q | . |
. |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
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|   |
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|   |
|   |   |   |   |   |
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| . | . | . | . |   |   |   |   |
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|   |   |   | . | . |
Alig confidence |   |
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| . | . | . | . |
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| . | . |
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
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|   |
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|   |
|   |   |   |   |   |
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|   |
|   |   |
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|   |
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|   |
|   |   |   |   |   |   |
Template Sequence |   |
V | T | P | V | Q | A | A | N | Q | Y | G | Y | A | G | L | S | A | A | Y | E | P | T | S | A | V | N | V | S | Q | T | G | Q | L | L | Y | Q | Y | N | I | D | T | K | W | N | P | A | S | M | T | K | L | M | T | M | Y | L | T | L | E | A | V | N | K | G | Q | L | S | L | D | D | T | V | T | M | T | N | K | E | Y | I |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  | T | T |
| T | T |
|
| G | G | G |
|
| S |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  | S | T | T |
|
| B |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
| T | T |
|  |  |  |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
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|  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
|  |  |  |  |  |
Template SS confidence |   |
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  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
  |   |
|
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
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Predicted Secondary structure |   |
. |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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| . | . | . | . |
Query SS confidence |   |
. |
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| . |
. |
. |
. |
Query Sequence |   |
. |
T | P | E | M | K | G | V | Y | S | R | V | R | L | N | S | E | I | S | R | K | D | M | L | L | L | A | L | M | S | S | E | N | R | A | A | A | S | L | A | H | H | Y | P | G | G | Y | K | A | F | I | K | A | M | N | A | K | A | K | S | L | G | M | N | N | T | R | F | V | E | P | T | G | L | S | V | . |
. |
. |
. |
Query Conservation |   |
. |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
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|   |
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|   |
|   |
|   |   |
|   |
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|   |
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|   |   |   |
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|   |   |
|   |   |
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|   |   |
|   |
|   |
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|   |
|
|   |   | . | . | . | . |
Alig confidence |   |
. |
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| . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|
|   |   |
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|   |   |
|   |
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|   |   |
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|   |   |
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|   |   |   |   |
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|   |   |
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|   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
M | S | T | L | P | E | L | S | N | T | K | L | Y | P | G | Q | V | W | T | I | A | D | L | L | Q | I | T | V | S | N | S | S | N | A | A | A | L | I | L | A | K | K | V | S | K | N | T | S | D | F | V | D | L | M | N | N | K | A | K | A | I | G | M | K | N | T | H | F | V | N | P | T | G | A | E | N | S | R | L | R |
Template Known Secondary structure |   |
 | T | T |
| T | T | S |
|
|
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
| B |
| S | S | S | S | S | S |
|  |  |  |  | G |
Template Predicted Secondary structure |   |
 |
|
|
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|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |
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|  |  |  |
|
Template SS confidence |   |
|
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  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
  |
  |   |
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170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
. | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
|
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|
| . | . | . |
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|  |  |  |  |  |  |  |
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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| . |
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| . |
. |
. |
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Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | N | V | S | T | A | R | D | L | T | K | L | L | I | A | S | K | Q | . |
Y | P | L | I | G | Q | L | S | T | T | R | E | D | M | A | T | F | S | N | P | T | Y | T | L | P | F | R | N | T | N | H | L | V | Y | R | . |
. |
. |
D | N | W | N | I | Q | L | T | K | T | G | F |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . |   |
|   |
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|   |
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|   |
|   |   |   |   |   |   | . |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   | . | . | . |   |   |   |   |
|   |
|   |
|
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|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . |
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| . |
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| . | . | . | . | . | . |
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| . | . | . |
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
Template Sequence |   |
S | F | A | P | T | K | Y | K | D | Q | E | R | T | V | T | T | A | R | D | Y | A | I | L | D | L | H | V | I | K | E | T | P | K | I | L | D | F | T | K | Q | L | A | P | T | T | H | . |
. |
. |
. |
. |
. |
A | V | T | Y | Y | T | F | N | F | S | L | E | G | A | K | M | S | L | P | G | T | D | G | L | K | T | G | S |
Template Known Secondary structure |   |
G | G | S |
| G | G | G | T | T |
|
|
|
| B | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  | T |
| S | S |
|  |  | T | . | . | . | . | . | . | T |  |  |
|
|
|
|
| T | T | S | T | T | S | T | T |
|
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
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|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . |
|  |  |  |  |  |  |
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|  |  |  |  |  |
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|
Template SS confidence |   |
|
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  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
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|
|
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |
  |   |
235 | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | |
|
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|
|
. | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
Predicted Secondary structure |   |
|
|
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|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
. |
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Query Sequence |   |
T | N | A | A | G | H | C | L | V | M | R | T | V | I | N | N | K | P | V | A | L | V | V | M | D | A | F | G | K | Y | T | . |
. |
. |
. |
. |
. |
H | F | A | D | A | S | R | L | R | T | W | I | E | T | G | K |
Query Conservation |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|   |   |   |   |   |   | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
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| . | . | . | . | . | . |
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Template Conservation |   |
|   |   |
|
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Template Sequence |   |
S | D | T | A | N | Y | N | H | T | I | T | T | K | R | G | K | F | R | I | N | Q | V | I | M | G | A | G | D | Y | K | N | L | G | G | E | K | Q | R | N | M | M | G | N | A | L | M | E | R | S | F | D | Q | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
263 | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . |
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