Job Description P0AFI5 Confidence 98.29% Date Thu Jan 5 11:26:25 GMT 2012 Rank 82 Aligned Residues 236 % Identity 15% Template d1onha_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.38

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.													.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	.	.	.	.	.	.	.	.	.	.	.	.	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	.	.	.	.	D	A	R	L	P	L	D	E	K	L	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.									.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		S	V	P	G	M	A	V	A	V	I	Y	.	.	Q	G	K	P	H	Y	Y	T	F	G	K	A	D	I	A	A	N	K	P	V	T	P	Q	T	L	F	E	L	G	S	I	S	K	T	F	T	G	V	L	G	G	D	A	I	A	R	G	E	I	S	L	D	D	P	V	T	R	Y	W	P	Q	L	T	G	K	Q	W
Template Known Secondary structure		T		S									.	.	T	T												T	T	T	T					T	T		B				G	G	G																T	S			T	T	S	B	G	G	G	T		T	T				G	G	G
Template Predicted Secondary structure													.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
			89	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.
Predicted Secondary structure		.								.																														.	.	.	.	.	.	.	.	.	.	.													.																.
Query SS confidence		.								.																														.	.	.	.	.	.	.	.	.	.	.													.																.
Query Sequence		.	K	V	D	I	S	Q	T	.	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	L	A	L	M	S	S	.	.	.	.	.	.	.	.	.	.	.	E	N	R	A	A	A	S	L	A	H	H	Y	.	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	.	K	S
Query Conservation		.								.																														.	.	.	.	.	.	.	.	.	.	.													.																.
Alig confidence		.								.																														.	.	.	.	.	.	.	.	.	.	.													.																.
Template Conservation
Template Sequence		Q	G	I	R	M	L	D	L	A	T	Y	T	A	G	G	L	P	L	Q	V	P	D	E	V	T	D	N	A	S	L	L	R	F	Y	Q	N	W	Q	P	Q	W	K	P	G	T	T	R	L	Y	A	N	A	S	I	G	L	F	G	A	L	A	V	K	P	S	G	M	P	Y	E	Q	A	M	T	T	R	V	L	K	P
Template Known Secondary structure		T	T		B							T		S	S				S	S			T	T			S														S	S		T	T	S																	T	G	G	G	T	S										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		L	G	M	N	N	T	R	F	V	E	P	T	G	L	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	.	.	.	.	.	.	P	L	I	G	Q	L	S	T	T	R	E	D
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	L	D	H	T	W	I	N	V	P	K	A	E	E	A	H	Y	A	W	G	Y	R	D	G	K	A	V	R	A	V	R	V	S	P	G	M	L	D	A	Q	A	Y	G	V	K	T	N	V	Q	D	M	A	N	W	V	M	A	N	M	A	P	E	N	V	A	D	A	S	L	K	Q	G	I	A	L	A	Q	S	R
Template Known Secondary structure		T	T		T	T			S	S			G	G	G	G	G	G	B						T	T										S	S	T	T																								G	G	G			S											T	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																											.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																		.
Template Sequence		Y	W	R	I	G	S	M	Y	Q	G	L	G	W	E	M	L	N	W	P	V	E	A	N	T	V	V	E	G	S	D	S	K	V	A	L	A	P	L	P	V	A	E	V	N	P	P	A	P	P	V	K	A	S	W	V	H	K	T	G	S	T	G	G	F	.	G	S	Y	V	A	F	I	P	E	K	Q	I	G	I	V
Template Known Secondary structure						T	T					S	S						S	S											S					T	S															S	S										S	S		.								G	G	G	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	V	M	D	A	F	G	K	Y	T	H	F	A	D	A	S	R	L	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	A	N	T	S	Y	P	N	P	A	R	V	E	A	A	Y	H	I	L	E
Template Known Secondary structure					S	B
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions