Job Description P0AFI5 Confidence 99.66% Date Thu Jan 5 11:26:25 GMT 2012 Rank 47 Aligned Residues 203 % Identity 15% Template d1nrfa_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.50

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																								.
Query SS confidence																	.	.																								.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	.	.	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	.	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L
Query Conservation																	.	.																								.
Alig confidence																	.	.																								.																							.	.	.	.	.	.									.	.	.
Template Conservation																																																																	.	.	.	.	.	.									.	.	.
Template Sequence		G	F	V	L	F	N	S	N	R	K	K	Y	T	I	Y	N	R	K	E	S	T	S	R	F	A	P	A	S	T	Y	K	V	F	S	A	L	L	A	L	E	S	G	I	I	T	K	N	D	S	H	M	T	W	D	G	T	Q	Y	P	Y	K	E	W	.	.	.	.	.	.	N	Q	D	Q	D	L	F	S	.	.	.
Template Known Secondary structure								T	T	T	T												S		B			G	G	G	G												T	S	S		S	S				B								S	S	T	T	T	.	.	.	.	.	.	S	S		B					.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.									.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.							.	.	440	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.
Predicted Secondary structure																																																		.	.																							.	.	.	.	.
Query SS confidence																																																		.	.																							.	.	.	.	.
Query Sequence		L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	.	.	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	.	.	.	.	.	P	L	I
Query Conservation																																																		.	.																							.	.	.	.	.
Alig confidence		.																			.	.	.	.	.	.																								.	.																							.	.	.	.	.
Template Conservation		.																			.	.	.	.	.	.
Template Sequence		.	A	M	S	S	S	T	T	W	Y	F	Q	K	L	D	R	Q	I	G	.	.	.	.	.	.	E	D	H	L	R	H	Y	L	K	S	I	H	Y	G	N	E	D	F	S	V	P	A	D	Y	W	L	D	G	S	L	Q	I	S	P	L	E	Q	V	N	I	L	K	K	F	Y	D	N	E	F	D	F	K	Q	S	N
Template Known Secondary structure		.					T														.	.	.	.	.	.											T	T		T	T				S		T	T	T	T	T	T	S	S	S	S		B															T	T	T
Template Predicted Secondary structure		.																			.	.	.	.	.	.
Template SS confidence
			446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.							.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	.	.	.	.	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	V	M	D	A	F	G	K	Y	T	H	F
Query Conservation																																																				.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	T	V	K	D	S	I	R	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	G	R	V	L	S	G	K	T	G	T	S	V	I	N	G	E	L	H	A	G	W	F	I	G	Y	V	E	T	A	D	N	T	F	F	F	A	V	H	I	Q	G	E	K	R	A	A	G
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T													S	S	S													S	S												S		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		519	520	.	.	.	.	.	.	.	.	.	530																				.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	S	R	L	R	T	W	I	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	A	A	E	I	A	L	S	I	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		580	.	.	.	.	.	.	.	.	.	590	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions