Job Description P0AFI5 Confidence 99.10% Date Thu Jan 5 11:26:25 GMT 2012 Rank 58 Aligned Residues 203 % Identity 14% Template d1m6ka_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.50

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	.	.	.	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L
Query Conservation																				.	.	.
Alig confidence																				.	.	.																																										.	.	.	.	.	.	.									.	.	.
Template Conservation																																																																.	.	.	.	.	.	.									.	.	.
Template Sequence		C	F	L	L	Y	D	A	S	T	N	A	E	I	A	Q	F	N	K	A	K	C	A	T	Q	M	A	P	D	S	T	F	I	A	L	S	L	M	A	F	D	A	E	I	I	D	Q	K	T	I	F	K	W	D	K	T	P	K	G	M	E	I	W	.	.	.	.	.	.	.	N	S	N	H	T	P	K	T	.	.	.
Template Known Secondary structure								T	T	T													T			B			G	G	G											T	T	S			T	T			B				S	S			S	S	G	G	G	.	.	.	.	.	.	.	S	S		B					.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.									.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.																					.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.																					.	.
Query Sequence		L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	S	.	.	.	.	.	.	.	.	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.																					.	.
Alig confidence		.																			.	.	.	.	.	.																										.	.	.	.	.	.	.	.																					.	.
Template Conservation		.																			.	.	.	.	.	.
Template Sequence		.	W	M	Q	F	S	V	V	W	V	S	Q	E	I	T	Q	K	I	G	.	.	.	.	.	.	L	N	K	I	K	N	Y	L	K	D	F	D	Y	G	N	Q	D	F	S	G	D	E	R	N	N	G	L	T	E	A	W	L	E	S	S	L	K	I	S	P	E	E	Q	I	Q	F	L	R	K	I	I	N	H	N	L
Template Known Secondary structure		.				T	T														.	.	.	.	.	.												T		T	T															T	T	S	S	S	S			B														T	T		S
Template Predicted Secondary structure		.																			.	.	.	.	.	.
Template SS confidence
			111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
					189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.						.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																			.	.	.	.	.															.							.
Query SS confidence		.	.	.																																																			.	.	.	.	.															.							.
Query Sequence		.	.	.	P	L	I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	.	.	.	.	.	G	H	C	L	V	M	R	T	V	I	N	N	K	P	.	V	A	L	V	V	M	.
Query Conservation		.	.	.																																																			.	.	.	.	.															.							.
Alig confidence		.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.															.							.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	K	N	S	A	I	E	N	T	I	E	N	M	Y	L	Q	D	L	D	N	S	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	G	K	T	G	A	G	F	T	A	N	R	T	L	Q	N	G	W	F	E	G	F	I	I	S	K	S	G	H	K	Y	V	F	V	S	A	L
Template Known Secondary structure		S	S											T	T						T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S	S													T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
				259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	A	F	G	K	Y	T	H	F	A	D	A	S	R	L	R	T	W	I	E	T
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		T	G	N	L	G	S	N	L	T	S	S	I	K	A	K	K	N	A	I	T	I	L	N
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions