Job Description P0AFI5 Confidence 99.37% Date Thu Jan 5 11:26:25 GMT 2012 Rank 54 Aligned Residues 181 % Identity 13% Template d1k55a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.39

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	.	.	.	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L
Query Conservation																			.	.	.
Alig confidence															.				.	.	.																															.	.	.	.	.	.																							.	.
Template Conservation															.																																					.	.	.	.	.	.																							.	.
Template Sequence		V	F	V	L	C	K	S	S	S	K	S	C	A	.	T	N	D	L	A	R	A	S	K	E	Y	L	P	A	S	T	F	I	P	N	A	I	I	G	L	E	T	G	V	I	K	N	E	H	Q	V	.	.	.	.	.	.	F	K	W	D	G	K	P	R	A	M	K	Q	W	E	R	D	L	T	L	R	G	A	.	.
Template Known Secondary structure								S	S	T	T	S			.		S						T			B			G	G	G											T	T	S	S		S	T	T			.	.	.	.	.	.					S				S	S	G	G	G	S	S								.	.
Template Predicted Secondary structure															.																																					.	.	.	.	.	.																							.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190
Predicted Secondary structure																																																		.	.	.																							.	.	.	.	.
Query SS confidence																																																		.	.	.																							.	.	.	.	.
Query Sequence		L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	.	.	.	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	.	.	.	.	.	P	L
Query Conservation																																																		.	.	.																							.	.	.	.	.
Alig confidence		.	.																		.	.	.	.	.	.																								.	.	.																							.	.	.	.	.
Template Conservation		.	.																		.	.	.	.	.	.
Template Sequence		.	.	I	Q	V	S	A	V	P	V	F	Q	Q	I	A	R	E	V	G	.	.	.	.	.	.	E	V	R	M	Q	K	Y	L	K	K	F	S	Y	G	N	Q	N	I	S	G	G	I	D	K	F	W	L	E	G	Q	L	R	I	S	A	V	N	Q	V	E	F	L	E	S	L	Y	L	N	K	L	S	A	S	K	E
Template Known Secondary structure		.	.			T	T														.	.	.	.	.	.											T	T		T	T					S		T	T	T	T	T	T	T	S	S			B														T	T		S	S	S
Template Predicted Secondary structure		.	.																		.	.	.	.	.	.
Template SS confidence
				112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	.	.	.	.	.	.	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	V	M
Query Conservation																																																			.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	L	I	V	K	E	A	L	V	T	E	A	A	P	E	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	S	K	T	G	F	S	G	V	G	T	E	S	N	P	G	V	A	W	W	V	G	W	V	E	K	E	T	E	V	Y	F	F	A	F	N
Template Known Secondary structure										T						T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S	S													T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions