Job Description P0AFI5 Confidence 99.98% Date Thu Jan 5 11:26:25 GMT 2012 Rank 36 Aligned Residues 223 % Identity 13% Template d1g6aa_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.75

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	.	.	.	.	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L
Query Conservation																																								.	.	.	.
Alig confidence															.																									.	.	.	.																							.
Template Conservation															.																																																			.
Template Sequence		G	V	S	V	L	D	T	Q	N	G	E	Y	W	.	D	Y	N	G	N	Q	R	F	P	L	T	S	T	F	K	T	I	A	C	A	K	L	L	Y	D	A	E	Q	G	K	V	N	P	N	S	T	V	E	I	K	K	A	D	L	V	T	Y	S	P	V	.	I	E	K	Q	V	G	Q	A	I	T	L	D	D	A	C
Template Known Secondary structure								T	T	T	T				.			S	T	T	S					G	G	G	G														T	T	S			T	T							G	G	G			S	S		T	T	.	G	G	G		T	T	S
Template Predicted Secondary structure															.																																																			.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	.	.	.	.	.	.	.	E	P	T	G	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	P	L
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		F	A	T	M	T	T	S	D	N	T	A	A	N	I	I	L	S	A	V	G	G	.	.	.	.	.	P	K	G	V	T	D	F	L	R	Q	I	G	D	K	E	T	R	L	D	R	I	E	P	D	L	N	E	G	K	L	G	D	L	R	D	T	T	T	P	K	A	I	A	S	T	L	N	K	F	L	F	G	S	A
Template Known Secondary structure																				T	T		.	.	.	.	.											T	T		S	S		B					T	T	G	G	G				T	T			T	T																	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	.	.	V	A	L	V	V	M	D	A	F	G	K	Y	T	H	F	A
Query Conservation																																																																.	.
Alig confidence																				.	.	.	.													.																												.	.
Template Conservation																				.	.	.	.													.
Template Sequence		L	S	E	M	N	Q	K	K	L	E	S	W	M	V	N	N	Q	V	.	.	.	.	T	G	N	L	L	R	S	V	L	P	A	G	.	W	N	I	A	D	K	S	G	A	G	G	F	G	A	R	S	I	T	A	V	V	W	S	E	H	Q	A	P	I	I	V	S	I	Y	L	A	Q	T	Q	A	S	M	E	E	R
Template Known Secondary structure		S														T		S	S	.	.	.	.		T	T	T	G	G	G	G			T	T	.											G	G	G											T	T												S
Template Predicted Secondary structure																				.	.	.	.													.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		269							270	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	A	S	R	L	R	T	W
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.
Template Conservation
Template Sequence		N	D	A	I	V	K	I	G	H	S	I	F	D	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions