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Job DescriptionP0AFI5
Confidence100.00%DateThu Jan 5 11:26:25 GMT 2012
Rank12Aligned Residues244
% Identity27%Templated1es5a_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70......... 80.........90...... ...100.........110
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Query Sequence  QPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLD. ARLPLDEKLKVDISQTP. . . EMKGVYSRVRLNSE
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Template Sequence  KPTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQSNLNLDAKVTIQKAYSDYVVANNASQAHLIVGDK
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S
STTT

STT

B

GGGGT
TT

TT


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TT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   111........120.........130.........140 .........150.........160....... ..170.........180...
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Query Sequence  ISRKDMLLLALMSSENRAAASLAHHYPGGY. . . . . . KAFIKAMNAKAKSLGMNNTRFVEPTGL. SVHNVSTARDLTKLLI
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Template Sequence  VTVRQLLYGLMLPSGCDAAYALADKYGSGSTRAARVKSFIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIAS
Template Known Secondary structure  SS

S
SSSTT
SS
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SSSS

S
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BB
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   184.....190.........200.........210.. .......220.........230.........240.........250.........
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Query Sequence  ASKQYPLIGQLSTTREDMATFSNPTYTLP. . . . FRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMD
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Template Sequence  SAMKNSTFRTVVKTKAYTAKTVTKTGSIRTMDTWKNTNGLLSSYS. GAIGVKTGAGPEAKYCLVFAATRGGKTVIGTVLA
Template Known Secondary structure  TTST
S


TTS




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   163......170.........180.........190.........200....... ..210.........220.........230.........240.
 
   260.........270.........
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Query Sequence  AFGKYTHFADASRLRTWIET
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Template Sequence  STSIPARESDATKIMNYGFA
Template Known Secondary structure  SS
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   242.......250.........260.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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