Job Description P0AFI5 Confidence 98.34% Date Thu Jan 5 11:26:25 GMT 2012 Rank 78 Aligned Residues 221 % Identity 16% Template d1ei5a3 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.90

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.														.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.													.
Template Conservation														.	.																																																			.	.	.													.
Template Sequence		Y	K	G	P	G	G	V	V	A	V	V	K	.	.	D	G	E	V	V	L	Q	H	A	W	G	F	A	D	L	R	T	R	T	P	M	T	L	D	T	R	M	P	I	C	S	V	S	K	Q	F	T	C	A	V	L	L	D	A	V	G	E	P	E	L	.	.	.	L	D	D	A	L	E	A	Y	L	D	K	F	.
Template Known Secondary structure		S		S	S									.	.	T	T													T	T	T	T					T	T						G	G	G													T		S	G	G	G	.	.	.	G								T	T	T		.
Template Predicted Secondary structure														.	.																																																			.	.	.													.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																																															.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	L	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	D	E	R	P	A	V	R	D	L	C	N	N	Q	S	G	L	R	D	Y	W	A	L	S	V	L	C	G	A	D	P	E	G	V	F	L	P	A	Q	A	Q	S	L	L	R	R	L	K	T	T	H	F	E	P	G	S	H	Y	S	Y	C	N	G	N	F	R	I	L	A	D	L	I	E	A	H	T
Template Known Secondary structure		.	.	.	.		S										T	T		S												T	T			T	T			B											T					S	S		T	T	S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation											.	.
Template Sequence		G	R	T	L	V	D	I	L	S	.	.	E	R	I	F	A	P	A	G	M	K	R	A	E	L	I	S	D	T	A	L	F	D	E	C	T	G	Y	E	G	D	T	V	R	G	F	L	P	A	T	N	R	I	Q	W	M	G	D	A	G	I	C	A	S	L	N	D	M	I	A	W	E	Q	F	I	D	A	T	R	D
Template Known Secondary structure		T	S								.	.			T					T		T	T						B	G	G	G			S	S							T	T	T									B	B			S	S	S																			T	T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
				189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	L	I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	V	M	D	A	F	G	K	Y	T	H
Query Conservation		.	.
Alig confidence		.	.																														.	.	.	.	.																	.
Template Conservation																																	.	.	.	.	.																	.
Template Sequence		D	E	S	G	L	Y	R	R	L	S	G	P	Q	T	F	K	D	G	V	A	A	P	Y	G	F	G	L	N	L	H	E	.	.	.	.	.	T	G	G	K	R	L	T	G	H	G	G	A	L	R	G	W	.	R	C	Q	R	W	H	C	A	D	E	R	L	S	T	I	A	M	F	N	F	E	G	G	A	S	E	V
Template Known Secondary structure			T	T	S						S	S			B		T	T	S		B		S			T	T						.	.	.	.	.		T	T											T	T		.								G	G	G	T								S	B	S	S
Template Predicted Secondary structure																																	.	.	.	.	.																	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.						.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		267	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	D	A	S	R	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	K	L	M	N	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions