Job Description P0AFI5 Confidence 99.97% Date Thu Jan 5 11:26:25 GMT 2012 Rank 40 Aligned Residues 227 % Identity 19% Template d1e25a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.9

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																								.	.	.	.																						.	.	.
Query SS confidence																																								.	.	.	.																						.	.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	.	.	.	.	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	.	.	.	V	Y	S	R	V	R	L	N	S	E	I	S	R	K
Query Conservation																																								.	.	.	.																						.	.	.
Alig confidence														.																										.	.	.	.																						.	.	.
Template Conservation														.
Template Sequence		G	V	A	V	W	G	P	D	D	L	E	P	.	L	L	I	N	P	F	E	K	F	P	M	Q	S	V	F	K	L	H	L	A	M	L	V	L	H	Q	V	D	Q	G	K	L	D	L	N	Q	T	V	I	V	N	R	A	K	V	L	Q	N	T	W	A	P	I	M	K	A	Y	Q	G	D	E	F	S	V	P	V	Q
Template Known Secondary structure								T	T		S	S		.				S	T	T						G	G	G															T	T	S	S		T	T							T	T	T	S			S	S			T					S		S	S
Template Predicted Secondary structure														.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		D	M	L	L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	.	.	.	.	.	.	.	E	P	T	G	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		Q	L	L	Q	Y	S	V	S	H	S	D	N	V	A	C	D	L	L	F	E	L	V	G	G	.	.	.	.	.	P	A	A	L	H	D	Y	I	Q	S	M	G	I	K	E	T	A	V	V	A	N	E	A	Q	M	H	A	D	D	Q	V	Q	Y	Q	N	W	T	S	M	K	G	A	A	E	I	L	K	K	F	E	Q
Template Known Secondary structure																								T		.	.	.	.	.											T	T			S	B													T	T	G	G	G	G	S																T
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.											.	.	.
Query SS confidence																																																															.	.	.	.	.	.											.	.	.
Query Sequence		Y	P	L	I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	.	.	.	.	.	.	N	N	K	P	V	A	L	V	V	M	.	.	.
Query Conservation																																																															.	.	.	.	.	.											.	.	.
Alig confidence																							.	.	.	.													.																								.	.	.	.	.	.											.	.	.
Template Conservation																							.	.	.	.													.
Template Sequence		K	T	Q	L	S	E	T	S	Q	A	L	L	W	K	W	M	V	E	T	T	T	.	.	.	.	G	P	E	R	L	K	G	L	L	P	A	G	.	T	V	V	A	H	K	T	G	T	S	Q	I	K	A	G	K	T	A	A	T	N	D	L	G	I	I	L	L	P	D	G	R	P	L	L	V	A	V	F	V	K	D
Template Known Secondary structure		T		S	S														S			S	.	.	.	.		T	T	S	T	T	T	T	S		T	T	.														T	T														T	T	S
Template Predicted Secondary structure																							.	.	.	.													.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		259	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		D	A	F	G	K	Y	T	H	F	A	D	.	.	.	.	A	S	R	L	R	T	W	I	E	T
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		S	A	E	S	S	R	T	N	E	A	I	I	A	Q	V	A	Q	T	A	Y	Q	F	E	L	K
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions