Job Description P0AFI5 Confidence 99.97% Date Thu Jan 5 11:26:25 GMT 2012 Rank 37 Aligned Residues 228 % Identity 17% Template d1djaa_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	A	R	L	P	.	.	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	L
Query Conservation																																												.	.
Alig confidence															.																													.	.																			.
Template Conservation															.																																																	.
Template Sequence		G	V	Y	A	L	D	T	K	S	G	K	E	V	.	K	F	N	S	D	K	R	F	A	Y	A	S	T	S	H	A	I	N	S	A	I	L	L	E	Q	V	P	Y	N	K	L	N	K	K	V	H	I	N	K	D	D	I	V	A	Y	S	P	I	.	L	E	K	Y	V	G	K	D	I	T	L	K	A	L	I	E	A
Template Known Secondary structure								T	T	T					.			S	T	T	S					G	G	G											T	S	S		G	G	G	T	T							G	G	G			S	S		T	T	.	G	G	G	G	T	T	S
Template Predicted Secondary structure															.																																																	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.
Query Sequence		A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	.	.	.	.	.	.	.	E	P	T	G	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	P	L	I	G
Query Conservation																																													.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		S	M	T	Y	S	D	N	T	A	N	N	K	I	I	K	E	I	G	G	.	.	.	.	.	I	K	K	V	K	Q	R	L	K	E	L	G	D	K	V	T	N	P	V	R	Y	E	I	E	L	N	Y	Y	S	P	K	S	K	K	D	T	S	T	P	A	A	F	G	K	T	L	N	K	L	I	A	N	G	K	L	S
Template Known Secondary structure					S														T		.	.	.	.	.											T	T			S							T	T	G	G	G				T	T			T	T															T	T	S	S	S
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.				.	.	.
Predicted Secondary structure																																																	.														.	.												.	.	.
Query SS confidence																																																	.														.	.												.	.	.
Query Sequence		Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	.	H	C	L	V	M	R	T	V	I	N	N	K	P	.	.	V	A	L	V	V	M	D	A	F	G	K	.	.	.	Y	T	H
Query Conservation																																																	.														.	.												.	.	.
Alig confidence																	.	.	.	.	.																												.														.	.												.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		K	E	N	K	K	F	L	L	D	L	M	L	N	N	K	.	.	.	.	.	S	G	D	T	L	I	K	D	G	V	P	K	D	Y	K	V	A	D	K	S	G	Q	A	I	T	Y	A	S	R	N	D	V	A	F	V	Y	P	K	G	Q	S	E	P	I	V	L	V	I	F	T	N	K	D	N	K	S	D	K	P	N
Template Known Secondary structure																S	.	.	.	.	.	T	T	T	T	T					S		T	T											S	S	T	T											T	T			S											S	S	T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	D	A	S	R	L	R	T	W	I	E	T	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	L	I	S	E	T	A	K	S	V	M	K	E	F
Template Known Secondary structure		T												T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions