Job Description P0AFI5 Confidence 100.00% Date Thu Jan 5 11:26:25 GMT 2012 Rank 25 Aligned Residues 222 % Identity 19% Template d1bsga_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																								.	.	.	.																								.	.	.
Query SS confidence																																								.	.	.	.																								.	.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	.	.	.	.	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	.	.	.	S	R	V	R	L	N	S	E	I	S	R	K
Query Conservation																																								.	.	.	.																								.	.	.
Alig confidence														.																										.	.	.	.																								.	.	.
Template Conservation														.
Template Sequence		G	V	Y	A	Y	D	T	G	S	G	R	T	.	V	A	Y	R	A	D	E	L	F	P	M	C	S	V	F	K	T	L	S	S	A	A	V	L	R	D	L	D	R	N	G	E	F	L	S	R	R	I	L	Y	T	Q	D	D	V	E	Q	A	D	G	A	P	E	T	G	K	P	Q	N	L	A	N	G	M	T	V	E
Template Known Secondary structure								T	T	T				.				S	T	T	S					G	G	G	G												T		S	S	S	T	T	T	T														T			T	T	T	T	S
Template Predicted Secondary structure														.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		D	M	L	L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	.	.	.	.	.	.	.	E	P	T	G	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		E	L	C	E	V	S	I	T	A	S	D	N	C	A	A	N	L	M	L	R	E	L	G	G	.	.	.	.	.	P	A	A	V	T	R	F	V	R	S	L	G	D	R	V	T	R	L	D	R	W	E	P	E	L	N	S	A	E	P	G	R	V	T	D	T	T	S	P	R	A	I	T	R	T	Y	G	R	L	V	L
Template Known Secondary structure										S														T	S	.	.	.	.	.	T										T	T		S	S					S		T	T	G	G	G				T	T			T	T																T
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.							.	260
Predicted Secondary structure																																																															.											.	.	.	.	.	.
Query SS confidence																																																															.											.	.	.	.	.	.
Query Sequence		Y	P	L	I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	.	N	N	K	P	V	A	L	V	V	M	.	.	.	.	.	.	D	A
Query Conservation																																																															.											.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																																					.											.	.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		G	D	A	L	N	P	R	D	R	R	L	L	T	S	W	L	L	A	N	T	.	.	.	.	.	T	S	G	D	R	F	R	A	G	L	P	D	D	W	T	L	G	D	K	T	G	A	G	R	Y	G	T	N	N	D	A	G	V	T	W	P	P	G	R	A	P	I	V	L	T	V	L	T	A	K	T	E	Q	D	A
Template Known Secondary structure		S	S	S	S														T			.	.	.	.	.	S		T	T	T					S		T	T	S										S	T	T											T	T	S												S	S	T	T
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		261	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	K	Y	T	H	F	A	D	A	S	R	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	D	D	G	L	V	A	D	A	A	R	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions