Job Description P0AFI5 Confidence 98.28% Date Thu Jan 5 11:26:25 GMT 2012 Rank 83 Aligned Residues 233 % Identity 19% Template c3ozhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase/d-alanine carboxypeptidase; PDBTitle: crystal structure of beta-lactamase/d-alanine carboxypeptidase from2 yersinia pestis Resolution 1.91 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.													.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	.	.	.	.	.	.	.	.	.	.	.	.	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	.	.	.	.	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence													.	.									.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.
Template Conservation													.	.																																																								.	.	.	.
Template Sequence		G	A	V	G	X	A	L	V	V	I	D	.	.	N	N	Q	V	V	N	R	S	F	G	E	T	Q	P	G	N	N	I	R	P	R	P	D	S	L	I	R	I	A	S	I	T	K	L	X	T	S	E	I	X	V	K	L	A	D	D	G	I	V	K	L	T	D	P	L	.	.	.	.	K	K	Y	A	P	K	G	V
Template Known Secondary structure		T		S									.	.	T	T										S	S	T	T							T	T		B				G	G	G															T	T	S			T	T		B	G	.	.	.	.	G	G	G	S		T	T
Template Predicted Secondary structure													.	.																																																								.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																																									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	.	P	G	G
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		N	V	P	S	Y	S	A	K	Q	P	I	R	L	L	H	L	A	S	H	T	S	G	L	P	R	E	Q	P	G	G	P	Q	K	R	P	V	F	T	W	P	T	K	D	N	R	W	Q	W	L	K	L	A	K	V	T	V	P	P	G	V	K	A	A	Y	S	N	L	A	Y	D	L	L	A	D	A	L	S	R	A	A
Template Known Secondary structure						S	S	T	T				B						T	T		S				S	S		S	S			S	S			T	T			S										T	T					S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.																						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.
Predicted Secondary structure														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		Y	K	A	F	I	K	A	M	N	A	K	A	.	K	S	L	G	M	N	N	T	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	P	T	G	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	.	.	Q	Y	P	L	I	G	Q	L	S
Query Conservation														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Alig confidence														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		G	K	P	Y	A	H	L	L	R	D	K	I	T	A	P	L	G	X	K	N	T	T	L	T	P	T	A	E	Q	C	K	R	L	X	I	G	V	G	S	S	R	C	G	N	T	V	A	A	A	G	S	G	G	I	Y	S	T	P	E	D	X	Q	H	W	X	Q	Q	F	L	A	S	D	N	S	A	P	K	R	S	A
Template Known Secondary structure		T	S										T					T		T	T		B	S	S							T	T	B				T	T								G	G	G	T	T	T	T															T	T	S		B	T	T	B				T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.
Query Sequence		T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	.	.	.	.	.	.	.	.	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	V	M	D	A	F	G	K	Y	T	H	F
Query Conservation																																							.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	E	Q	A	L	Y	F	Q	R	G	D	L	V	S	L	K	G	X	D	V	A	G	Q	A	D	A	L	G	L	G	W	V	Y	X	A	P	K	A	D	L	P	G	I	X	Q	K	T	G	G	G	G	G	F	I	T	Y	X	A	X	V	P	E	K	N	I	G	V	F	V	V	V	T	R	S	Q	L	T	K	F
Template Known Secondary structure					T						G	G	G	S	S				S			T	T	S			S				S	S							B	T	T	B											T	T									G	G	G	T											T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		268	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	S	R	L	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	X	S	D	G	V	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions