Job Description P0AFI5 Confidence 98.51% Date Thu Jan 5 11:26:25 GMT 2012 Rank 75 Aligned Residues 229 % Identity 20% Template c3o3vB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of clbp peptidase domain Resolution 2.40 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	.	.	.	.	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S
Query Conservation																																												.	.	.	.
Alig confidence																				.	.	.																						.	.	.	.									.	.	.	.	.
Template Conservation																				.	.	.																																		.	.	.	.	.
Template Sequence		V	R	Q	R	F	V	Y	G	V	A	D	V	A	S	Q	K	A	N	.	.	.	T	L	D	T	V	Y	E	L	G	S	M	S	K	A	F	T	G	L	V	V	Q	I	L	I	Q	E	G	R	L	R	Q	G	D	.	.	.	.	.	D	I	I	T	Y	L	P	E	M	R	L	N	Y	Q	G	K	P	A	S	L	T
Template Known Secondary structure													T	T	T	T				.	.	.		T	T		B				G	G	G	G														T	T	S			T	T	S	.	.	.	.	.	B						T	T						T	T						B
Template Predicted Secondary structure																				.	.	.																																		.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120																																				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																.
Query Sequence		R	K	D	M	L	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	.	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	.	K	S	L	G
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																.
Template Conservation
Template Sequence		V	A	D	F	L	Y	H	T	S	G	L	P	F	S	T	L	A	R	L	E	N	P	M	P	G	S	A	V	A	Q	Q	L	R	N	E	N	L	L	F	A	P	G	A	K	F	S	Y	A	S	A	N	Y	D	V	L	G	A	V	I	E	N	V	T	G	K	T	F	T	E	V	I	A	E	R	L	T	Q	P	L	G
Template Known Secondary structure							T	T		S				T								S			S	S							S	T	T				S	S		T	T	S						T	T														S	S										T					T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																													.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		M	N	N	T	R	F	V	E	P	T	G	L	S	V	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	P	L	.	.	.	.	.	I	G	Q	L	S	T	T	R	E	D	M	A
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		M	S	A	T	V	A	V	K	G	D	E	I	I	V	N	K	A	S	G	Y	K	L	G	F	G	K	P	V	L	F	H	A	P	L	A	R	N	H	V	P	A	A	Y	I	H	S	T	L	P	D	M	E	I	W	I	D	A	W	L	H	R	K	A	L	P	A	T	L	R	E	A	M	S	N	S	W	R	G	N	S
Template Known Secondary structure			S	S						S	S				T	T	B				B			S	S	S			B				S				S	T	T					T																	T	G	G	G	S												T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	V	M	D	A	F	G	K	Y	T	H	F	A	D	A	S	R	L	R	T	W	I
Query Conservation
Alig confidence																													.																				.	.	.
Template Conservation																													.																				.	.	.
Template Sequence		D	V	P	L	A	A	D	N	R	I	L	Y	A	S	G	W	F	I	D	Q	N	Q	G	P	Y	I	S	.	H	G	G	Q	N	P	N	F	S	S	C	I	A	L	R	P	D	Q	Q	.	.	.	I	G	I	V	A	L	A	N	M	N	S	N	L	I	L	Q	L	C	A	D	I	D	N	Y	L
Template Known Secondary structure		S	S				S	S							S	S						T	T	S					.						S	S									G	G	G	T	.	.	.								S	B
Template Predicted Secondary structure																													.																				.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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