Job Description P0AFI5 Confidence 99.45% Date Thu Jan 5 11:26:25 GMT 2012 Rank 52 Aligned Residues 174 % Identity 16% Template c3if6C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:oxa-46 oxacillinase; PDBTitle: crystal structure of oxa-46 beta-lactamase from p.2 aeruginosa Resolution 2.40 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	.	.	.	.	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																															.	.	.	.	.	.	.	.																				.	.
Template Conservation																																																					.	.	.	.	.	.	.	.																				.	.
Template Sequence		A	I	V	I	A	D	E	R	Q	A	K	H	T	L	S	V	F	D	Q	E	R	A	A	K	R	Y	S	P	A	S	T	F	I	P	H	T	L	F	A	L	D	A	D	A	V	R	D	E	F	Q	V	.	.	.	.	.	.	.	.	F	R	W	V	N	R	S	F	A	G	H	N	Q	D	Q	D	L	R	S	.	.
Template Known Secondary structure									S	S	S	S							S						S		B			G	G	G												T	S			S	S	S			.	.	.	.	.	.	.	.	B						S	S	T	T	T	S	S		B					.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	.	.	.	.	.	P	L	I	G
Query Conservation																																																																									.	.	.	.	.
Alig confidence		.	.																			.	.	.	.	.	.													.	.	.	.	.																													.	.	.	.	.
Template Conservation		.	.																			.	.	.	.	.	.													.	.	.	.	.
Template Sequence		.	.	A	M	R	N	S	T	V	W	V	Y	E	L	F	A	K	D	I	G	.	.	.	.	.	.	E	D	K	A	R	R	Y	L	K	Q	I	D	.	.	.	.	.	Y	G	N	D	Y	W	I	D	G	N	L	K	I	S	A	H	E	Q	I	L	F	L	R	K	L	Y	R	N	Q	L	P	F	K	V	E	H	Q
Template Known Secondary structure		.	.					T														.	.	.	.	.	.											T	T	.	.	.	.	.					T	T	T	T	S	S			B														T	T		S	S	S
Template Predicted Secondary structure		.	.																			.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
				116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	V	M
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		R	L	V	K	D	L	M	I	T	E	A	G	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	I	L	R	A	K	T	G	W	E	G	R	F	G	.	W	W	V	G	W	I	E	W	P	T	G	P	V	F	F	A	L	N
Template Known Secondary structure								T						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S			.									T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.																				.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions