Job Description P0AFI5 Confidence 99.34% Date Thu Jan 5 11:26:25 GMT 2012 Rank 55 Aligned Residues 233 % Identity 16% Template c3i7jB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase mb2281c; PDBTitle: crystal structure of a beta-lactamase (mb2281c) from2 mycobacterium bovis, northeast structural genomics3 consortium target mbr246 Resolution 2.20 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		A	A	A	T	T	A	S	Q	P	E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	.	.	.	.	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S
Query Conservation																																																					.	.	.	.
Alig confidence																						.																															.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	L	E	V	L	G	G	W	P	V	P	A	A	A	A	A	V	I	G	.	P	A	G	V	L	A	T	H	G	D	T	A	R	V	F	A	L	A	S	V	T	K	P	L	V	A	R	A	A	Q	V	A	V	E	E	G	V	V	N	L	D	T	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				G	G	G	G	G	G	S	S	S	S									.	T	T							S		T	T						G	G	G																T	S			T	T	S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.																		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.															.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.															.
Query Sequence		R	V	R	L	N	S	E	I	S	R	K	D	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	.	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	.	A	K	S	L	G	M	N	N	T	R	F	V	E	P
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.															.
Alig confidence		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.												.															.
Template Conservation		.	.	.																																				.
Template Sequence		.	.	.	G	P	P	G	S	T	V	R	H	L	L	A	H	T	S	G	L	A	X	H	S	D	Q	A	L	A	R	P	G	T	R	R	X	Y	S	.	N	Y	G	F	T	V	L	A	E	S	V	Q	R	E	S	G	I	E	F	G	R	Y	L	T	E	A	V	C	E	P	L	G	X	V	T	T	R	L	D	G	G
Template Known Secondary structure		.	.	.	S	S	T	T		B						T	T		S		B		S	S	S	S		B		S		T	T	S	S					.																T	S										T					T		T	T					S	G
Template Predicted Secondary structure		.	.	.																																				.
Template SS confidence
					66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		165	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.															.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	L	.	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	P	L	I	G	Q	L	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L
Query Conservation					.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	A	A	G	F	G	A	T	S	T	V	A	D	L	A	V	F	A	G	D	L	L	R	P	S	T	V	S	A	Q	X	H	A	D	A	T	T	V	Q	F	P	G	L	D	G	V	L	P	G	Y	G	V	Q	R	P	N	D	W	G	L	G	F	E	I	R	N	S	K	S	P	H	W	T	G	E	C	N	S	T
Template Known Secondary structure		G	G	G	T	T	T																		S			S	S									T	S		S	S	T	T						T	T	S				S	S			B		S	S	S				T	T		S	S		S	S		T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	V	M	D	A	F	G	K	Y	T	H	F	A	D	A	S	.	R	L	R	T	W	I	E	T	G	K	V	M
Query Conservation																																												.
Alig confidence															.	.	.																											.
Template Conservation															.	.	.
Template Sequence		R	T	F	G	H	F	G	Q	S	G	G	F	I	.	.	.	W	V	D	P	K	A	D	L	A	L	V	V	L	T	A	R	D	F	G	D	W	A	L	D	L	W	P	A	I	S	D	A	V	L	A	E	Y	T	L
Template Known Secondary structure		T							T	T	T				.	.	.				T	T	T	T								S	S			S					T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions